Sequences for HUMAN39323

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN39323 (RPAB1_HUMAN)

E Homo sapiens | DNA-directed RNA polymerases I, II, and III subuni [POLR2E]

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Orthologs 891

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 25
Gene information
GO Annotations
Sequences/Isoforms 9
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN39320 reference isoform	210			7	RPAB1_HUMAN
	HUMAN39321	210			7	RPAB1_HUMAN
	HUMAN39322	83			4	A0A087WVN5
	HUMAN39324	68			3	K7EJ87
	HUMAN39325	51			2	K7EQN2
	HUMAN39326	204			7	A0A0A0MQR7
	HUMAN39327	184			7	A0A087WVZ9
	HUMAN39328	134			6	A0A087WWX0
	HUMAN39323	210			7	RPAB1_HUMAN

Protein Sequence

Download: Fasta

MDDEEETYRL WKIRKTIMQL CHDRGYLVTQ DELDQTLEEF KAQSGDKPSE GRPRRTDLTV    60
LVAHNDDPTD QMFVFFPEEP KVGIKTIKVY CQRMQEENIT RALIVVQQGM TPSAKQSLVD   120
MAPKYILEQF LQQELLINIT EHELVPEHVV MTKEEVTELL ARYKLRENQL PRIQAGDPVA   180
RYFGIKRGQV VKIIRPSETA GRYITYRLVQ                                    210

cDNA Sequence

Download: Fasta

ATGGACGACG AGGAGGAGAC GTACCGGCTC TGGAAAATCC GCAAGACCAT CATGCAGCTG    60
TGCCACGACC GTGGCTATCT GGTGACCCAG GACGAGCTTG ACCAGACCCT GGAGGAGTTC   120
AAAGCCCAAT CTGGGGACAA GCCGAGTGAG GGGCGGCCGC GGCGCACGGA CCTCACCGTG   180
CTGGTGGCCC ACAACGATGA CCCCACCGAC CAGATGTTTG TGTTCTTTCC AGAGGAGCCC   240
AAGGTGGGCA TCAAGACCAT CAAGGTGTAC TGCCAGCGCA TGCAGGAGGA GAACATCACA   300
CGGGCTCTCA TCGTGGTGCA GCAGGGCATG ACACCCTCCG CCAAGCAGTC CCTGGTCGAC   360
ATGGCCCCCA AGTACATCCT GGAGCAGTTT CTGCAGCAGG AGCTGCTCAT CAACATCACG   420
GAGCACGAGC TAGTCCCTGA GCACGTCGTC ATGACCAAGG AGGAGGTGAC AGAGCTGCTG   480
GCCCGATATA AGCTCCGAGA GAACCAGCTG CCCAGGATCC AGGCGGGGGA CCCTGTGGCG   540
CGCTACTTTG GGATAAAGCG TGGGCAGGTG GTGAAGATCA TCCGGCCCAG TGAGACGGCT   600
GGCAGGTACA TCACCTACCG GCTGGTGCAG TAG                                633