Sequences for HUMAN35351

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN35351 (PTH2_HUMAN)

E Homo sapiens | Peptidyl-tRNA hydrolase 2, mitochondrial [PTRH2]

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Orthologs 733

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 263
Gene information
GO Annotations
Sequences/Isoforms 3
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN35350 reference isoform	179			1	PTH2_HUMAN
	HUMAN35352	179			1	PTH2_HUMAN
	HUMAN35351	180			2	PTH2_HUMAN

Protein Sequence

Download: Fasta

MPSKSLVMEY LAHPSTLGLA VGVACGMCLG WSLRVCFGML PKSKTSKTHT DTESEASILG    60
DSGEYKMILV VRNDLKMGKG KVAAQCSHAA VSAYKQIQRR NPEMLKQWEY CGQPKVVVKA   120
PDEETLIALL AHAKMLGLTV SLIQDAGRTQ IAPGSQTVLG IGPGPADLID KVTGHLKLY    179

cDNA Sequence

Download: Fasta

ATGCCCTCCA AATCCTTGGT TATGGAATAT TTGGCTCATC CCAGTACACT CGGCTTGGCT    60
GTTGGAGTTG CTTGTGGCAT GTGCCTGGGC TGGAGCCTTC GAGTATGCTT TGGGATGCTC   120
CCCAAAAGCA AGACGAGCAA GACACACACA GATACTGAAA GTGAAGCAAG CATCTTGGGA   180
GACAGCGGGG AGTACAAGAT GATTCTTGTG GTTCGAAATG ACTTAAAGAT GGGAAAAGGG   240
AAAGTGGCTG CCCAGTGCTC TCATGCTGCT GTTTCAGCCT ACAAGCAGAT TCAAAGAAGA   300
AATCCTGAAA TGCTCAAACA ATGGGAATAC TGTGGCCAGC CCAAGGTGGT GGTCAAAGCT   360
CCTGATGAAG AAACCCTGAT TGCATTATTG GCCCATGCAA AAATGCTGGG ACTGACTGTA   420
AGTTTAATTC AAGATGCTGG ACGTACTCAG ATTGCACCAG GCTCTCAAAC TGTCCTAGGG   480
ATTGGGCCAG GACCAGCAGA CCTAATTGAC AAAGTCACTG GTCACCTAAA ACTTTACTAG   540