Sequences for HUMAN34697

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN34697 (HXB6_HUMAN)

E Homo sapiens | Homeobox protein Hox-B6 [HOXB6]

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Orthologs 189

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 1
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN34696 reference isoform	224			2	HXB6_HUMAN
	HUMAN34697	224			2	HXB6_HUMAN

Protein Sequence

Download: Fasta

MSSYFVNSTF PVTLASGQES FLGQLPLYSS GYADPLRHYP APYGPGPGQD KGFATSSYYP    60
PAGGGYGRAA PCDYGPAPAF YREKESACAL SGADEQPPFH PEPRKSDCAQ DKSVFGETEE   120
QKCSTPVYPW MQRMNSCNSS SFGPSGRRGR QTYTRYQTLE LEKEFHYNRY LTRRRRIEIA   180
HALCLTERQI KIWFQNRRMK WKKESKLLSA SQLSAEEEEE KQAE                    224

cDNA Sequence

Download: Fasta

ATGAGTTCCT ATTTCGTGAA CTCCACCTTC CCCGTCACTC TGGCCAGCGG GCAGGAGTCC    60
TTCCTGGGCC AGCTACCGCT CTATTCGTCG GGCTATGCGG ACCCGCTGAG ACATTACCCC   120
GCGCCCTACG GGCCAGGGCC GGGCCAGGAC AAGGGCTTTG CCACTTCCTC CTATTACCCG   180
CCGGCGGGCG GTGGCTACGG CCGAGCGGCG CCCTGCGACT ACGGGCCGGC GCCGGCCTTC   240
TACCGCGAGA AAGAGTCGGC CTGCGCACTC TCCGGCGCCG ACGAGCAGCC CCCGTTCCAC   300
CCCGAGCCGC GGAAGTCGGA CTGCGCGCAG GACAAGAGCG TGTTCGGCGA GACAGAAGAG   360
CAGAAGTGCT CCACTCCGGT CTACCCGTGG ATGCAGCGGA TGAATTCGTG CAACAGTTCC   420
TCCTTTGGGC CCAGCGGCCG GCGAGGCCGC CAGACATACA CACGTTACCA GACGCTGGAG   480
CTGGAGAAGG AGTTTCACTA CAATCGCTAC CTGACGCGGC GGCGGCGCAT CGAGATCGCG   540
CACGCCCTGT GCCTGACGGA GAGGCAGATC AAGATATGGT TCCAGAACCG ACGCATGAAG   600
TGGAAAAAGG AGAGCAAACT GCTCAGCGCG TCTCAGCTCA GTGCCGAGGA GGAGGAAGAA   660
AAACAGGCCG AGTGA                                                    675