Sequences for HUMAN31334

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN31334 (CLD7_HUMAN)

E Homo sapiens | Claudin-7 [CLDN7]

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Orthologs 203

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 652
Gene information
GO Annotations
Sequences/Isoforms 7
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN31335	145			3	F5H496
	HUMAN31336	211			4	CLD7_HUMAN
	HUMAN31337	99			3	I3L3L6
	HUMAN31338	193			5	I3L3X1
	HUMAN31339	140			3	K7EL87
	HUMAN31340	129			2	K7EP40
	HUMAN31334 reference isoform	211			4	CLD7_HUMAN

Protein Sequence

Download: Fasta

MANSGLQLLG FSMALLGWVG LVACTAIPQW QMSSYAGDNI ITAQAMYKGL WMDCVTQSTG    60
MMSCKMYDSV LALSAALQAT RALMVVSLVL GFLAMFVATM GMKCTRCGGD DKVKKARIAM   120
GGGIIFIVAG LAALVACSWY GHQIVTDFYN PLIPTNIKYE FGPAIFIGWA GSALVILGGA   180
LLSCSCPGNE SKAGYRVPRS YPKSNSSKEY V                                  211

cDNA Sequence

Download: Fasta

ATGGCCAATT CGGGCCTGCA GTTGCTGGGC TTCTCCATGG CCCTGCTGGG CTGGGTGGGT    60
CTGGTGGCCT GCACCGCCAT CCCGCAGTGG CAGATGAGCT CCTATGCGGG TGACAACATC   120
ATCACGGCCC AGGCCATGTA CAAGGGGCTG TGGATGGACT GCGTCACGCA GAGCACGGGG   180
ATGATGAGCT GCAAAATGTA CGACTCGGTG CTCGCCCTGT CCGCGGCCTT GCAGGCCACT   240
CGAGCCCTAA TGGTGGTCTC CCTGGTGCTG GGCTTCCTGG CCATGTTTGT GGCCACGATG   300
GGCATGAAGT GCACGCGCTG TGGGGGAGAC GACAAAGTGA AGAAGGCCCG TATAGCCATG   360
GGTGGAGGCA TAATTTTCAT CGTGGCAGGT CTTGCCGCCT TGGTAGCTTG CTCCTGGTAT   420
GGCCATCAGA TTGTCACAGA CTTTTATAAC CCTTTGATCC CTACCAACAT TAAGTATGAG   480
TTTGGCCCTG CCATCTTTAT TGGCTGGGCA GGGTCTGCCC TAGTCATCCT GGGAGGTGCA   540
CTGCTCTCCT GTTCCTGTCC TGGGAATGAG AGCAAGGCTG GGTACCGTGT ACCCCGCTCT   600
TACCCTAAGT CCAACTCTTC CAAGGAGTAT GTGTGA                             636