Sequences for HUMAN13199

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN13199 (GTSF1_HUMAN)

E Homo sapiens | Gametocyte-specific factor 1 [GTSF1]

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Orthologs 176

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 75
Gene information
GO Annotations
Sequences/Isoforms 3
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN13198	176			7	G3V1V4
	HUMAN13200	167			7	GTSF1_HUMAN
	HUMAN13199 reference isoform	167			7	GTSF1_HUMAN

Protein Sequence

Download: Fasta

MEETYTDSLD PEKLLQCPYD KNHQIRACRF PYHLIKCRKN HPDVASKLAT CPFNARHQVP    60
RAEISHHISS CDDRSCIEQD VVNQTRSLRQ ETLAESTWQC PPCDEDWDKD LWEQTSTPFV   120
WGTTHYSDNN SPASNIVTEH KNNLASGMRV PKSLPYVLPW KNNGNAQ                 167

cDNA Sequence

Download: Fasta

ATGGAAGAAA CTTACACCGA CTCCCTGGAC CCTGAGAAGC TATTGCAATG CCCCTATGAC    60
AAAAACCATC AAATCAGGGC TTGCAGGTTT CCTTATCATC TTATCAAGTG CAGAAAGAAT   120
CATCCTGATG TTGCAAGCAA ATTGGCTACT TGTCCCTTCA ATGCTCGCCA CCAGGTTCCT   180
CGAGCTGAAA TTAGTCATCA TATCTCAAGC TGTGATGACA GAAGTTGTAT TGAGCAAGAT   240
GTTGTCAACC AAACCAGGAG CCTTAGACAA GAGACTCTGG CTGAGAGCAC TTGGCAGTGC   300
CCTCCTTGCG ATGAAGACTG GGATAAAGAT TTGTGGGAGC AGACCAGCAC CCCATTTGTC   360
TGGGGCACAA CTCACTACTC TGACAACAAC AGCCCTGCGA GCAACATAGT TACAGAACAT   420
AAGAATAACC TGGCTTCAGG CATGCGAGTT CCCAAATCTC TGCCGTATGT TCTGCCATGG   480
AAAAACAATG GAAATGCACA GTAA                                          504