Sequences for HUMAN12556

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN12556 (AQP5_HUMAN)

E Homo sapiens | Aquaporin-5 [AQP5]

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Orthologs 3960

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 2020
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN12556 reference isoform	265			4	AQP5_HUMAN

Protein Sequence

Download: Fasta

MKKEVCSVAF LKAVFAEFLA TLIFVFFGLG SALKWPSALP TILQIALAFG LAIGTLAQAL    60
GPVSGGHINP AITLALLVGN QISLLRAFFY VAAQLVGAIA GAGILYGVAP LNARGNLAVN   120
ALNNNTTQGQ AMVVELILTF QLALCIFAST DSRRTSPVGS PALSIGLSVT LGHLVGIYFT   180
GCSMNPARSF GPAVVMNRFS PAHWVFWVGP IVGAVLAAIL YFYLLFPNSL SLSERVAIIK   240
GTYEPDEDWE EQREERKKTM ELTTR                                         265

cDNA Sequence

Download: Fasta

ATGAAGAAGG AGGTGTGCTC CGTGGCCTTC CTCAAGGCCG TGTTCGCAGA GTTCTTGGCC    60
ACCCTCATCT TCGTCTTCTT TGGCCTGGGC TCGGCCCTCA AGTGGCCGTC GGCGCTGCCT   120
ACCATCCTGC AGATCGCGCT GGCGTTTGGC CTGGCCATAG GCACGCTGGC CCAGGCCCTG   180
GGACCCGTGA GCGGCGGCCA CATCAACCCC GCCATCACCC TGGCCCTCTT GGTGGGCAAC   240
CAGATCTCGC TGCTCCGGGC TTTCTTCTAC GTGGCGGCCC AGCTGGTGGG CGCCATTGCC   300
GGGGCTGGCA TCCTCTACGG TGTGGCACCG CTCAATGCCC GGGGCAATCT GGCCGTCAAC   360
GCGCTCAACA ACAACACAAC GCAGGGCCAG GCCATGGTGG TGGAGCTGAT TCTGACCTTC   420
CAGCTGGCAC TCTGCATCTT CGCCTCCACT GACTCCCGCC GCACCAGCCC TGTGGGCTCC   480
CCAGCCCTGT CCATTGGCCT GTCTGTCACC CTGGGCCACC TTGTCGGAAT CTACTTCACT   540
GGCTGCTCCA TGAACCCAGC CCGCTCTTTT GGCCCTGCGG TGGTCATGAA TCGGTTCAGC   600
CCCGCTCACT GGGTTTTCTG GGTAGGGCCC ATCGTGGGGG CGGTCCTGGC TGCCATCCTT   660
TACTTCTACC TGCTCTTCCC CAACTCCCTG AGCCTGAGTG AGCGTGTGGC CATCATCAAA   720
GGCACGTATG AGCCTGACGA GGACTGGGAG GAGCAGCGGG AAGAGCGGAA GAAGACCATG   780
GAGCTGACCA CCCGCTGA                                                 798