Sequences for HUMAN12318

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN12318 (AN32D_HUMAN)

E Homo sapiens | Acidic leucine-rich nuclear phosphoprotein 32 fami [ANP32D]

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Orthologs 38

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 3
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN12318 reference isoform	131			1	AN32D_HUMAN

Protein Sequence

Download: Fasta

MEMGKWIHLE LRNRTPSDVK ELFLDNSQSN EGKLEGLTDE FEELELLNTI NIGLTSIANL    60
PKLNKLKKLE LSSNRASVGL EVLAEKCPNL IHLNLSGNKI KDLSTIEPLK KLENLESLDL   120
FTCEVTNLNN Y                                                        131

cDNA Sequence

Download: Fasta

ATGGAGATGG GCAAATGGAT TCATTTAGAG CTGCGGAACA GGACGCCCTC CGATGTGAAA    60
GAACTTTTCC TGGACAACAG TCAGTCAAAT GAAGGCAAAT TGGAAGGCCT CACAGATGAA   120
TTTGAAGAAC TGGAATTATT AAATACAATC AACATAGGCC TCACCTCAAT TGCAAACTTG   180
CCAAAGTTAA ACAAACTTAA GAAGCTTGAA CTAAGCAGTA ACAGAGCCTC AGTGGGCCTA   240
GAAGTATTGG CAGAAAAGTG TCCAAACCTC ATACATCTAA ATTTAAGTGG CAACAAAATT   300
AAAGACCTCA GCACAATAGA GCCCCTGAAA AAGTTAGAAA ACCTCGAGAG CTTAGACCTT   360
TTCACTTGCG AGGTAACCAA CCTGAACAAC TACTGA                             396