Sequences for HUMAN09474

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN09474 (CK071_HUMAN)

E Homo sapiens | Uncharacterized protein C11orf71 [C11orf71]

‹

Orthologs 52

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN09473 reference isoform	147			2	CK071_HUMAN
	HUMAN09474	123			1	CK071_HUMAN

Protein Sequence

Download: Fasta

MALNNVSLSS GDQRSRVAYR SSHGDLRPRA SALAMVSGDG FLVSRPEAIH LGPRQAVRPS    60
VRAESRRVDG GGRSPREPDG RGRSRQARFS PYPIPAVEPD LLRSVLQQRL IALGVTTWTL   120
KLSESATPDL RWCSTCSHSN IFEILVI                                       147

cDNA Sequence

Download: Fasta

ATGGCCCTGA ACAATGTGTC CCTGTCCTCC GGTGATCAGA GGAGCAGGGT GGCCTACCGC    60
TCTTCCCATG GCGACCTCAG ACCGCGGGCG TCAGCGTTGG CGATGGTCTC CGGAGACGGC   120
TTCCTCGTTT CCAGGCCTGA AGCGATTCAT CTAGGACCTC GGCAGGCGGT GCGACCAAGC   180
GTTCGGGCCG AGAGCCGTCG AGTGGATGGT GGCGGCCGGA GCCCAAGGGA ACCAGATGGC   240
CGGGGCCGGA GCCGCCAAGC CAGATTCTCA CCTTACCCAA TCCCTGCCGT TGAACCCGAT   300
CTCCTAAGAA GTGTGCTGCA ACAGCGTTTG ATTGCATTAG GAGTTACTAC CTGGACCCTG   360
AAGCTATCTG AGTCTGCAAC CCCTGATTTA AGATGGTGTT CAACATGCAG CCATTCAAAT   420
ATTTTTGAAA TTTTAGTAAT ATGA                                          444