Sequences for HUMAN06405

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN06405 (TM138_HUMAN)

E Homo sapiens | Transmembrane protein 138 [TMEM138]

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Orthologs 311

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 5
Gene information
GO Annotations
Sequences/Isoforms 3
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN06406 reference isoform	162			4	TM138_HUMAN
	HUMAN06407	104			3	ENSG00000149483.12
	HUMAN06405	105			2	TM138_HUMAN

Protein Sequence

Download: Fasta

MLQTSNYSLV LSLQFLLLSY DLFVNSFSEL LQKTPVIQLV LFIIQDIAVL FNIIIIFLMF    60
FNTFVFQAGL VNLLFHKFKG TIILTAVYFA LSISLHVWVM NLRWKNSNSF IWTDGLQMLF   120
VFQRLAAVLY CYFYKRTAVR LGDPHFYQDS LWLRKEFMQV RR                      162

cDNA Sequence

Download: Fasta

ATGCTCCAGA CCAGTAACTA CAGCCTGGTG CTCTCTCTGC AGTTCCTGCT GCTGTCCTAT    60
GACCTCTTTG TCAATTCCTT CTCAGAACTG CTCCAAAAGA CTCCTGTCAT CCAGCTTGTG   120
CTCTTCATCA TCCAGGATAT TGCAGTCCTC TTCAACATCA TCATCATTTT CCTCATGTTC   180
TTCAACACCT TCGTCTTCCA GGCTGGCCTG GTCAACCTCC TATTCCATAA GTTCAAAGGG   240
ACCATCATCC TGACAGCTGT GTACTTTGCC CTCAGCATCT CCCTTCATGT CTGGGTCATG   300
AACTTACGCT GGAAAAACTC CAACAGCTTC ATATGGACAG ATGGACTTCA AATGCTGTTT   360
GTATTCCAGA GACTAGCAGC AGTGTTGTAC TGCTACTTCT ATAAACGGAC AGCCGTAAGA   420
CTAGGCGATC CTCACTTCTA CCAGGACTCT TTGTGGCTGC GCAAGGAGTT CATGCAAGTT   480
CGAAGGTGA                                                           489