Sequences for HUMAN05301

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN05301 (CD59_HUMAN)

E Homo sapiens | CD59 glycoprotein [CD59]

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Orthologs 169

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 1
Gene information
GO Annotations
Sequences/Isoforms 4
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN05302	108			4	E9PNW4
	HUMAN05303 reference isoform	128			3	CD59_HUMAN
	HUMAN05304	52			1	H0YET2
	HUMAN05301	130			4	CD59_HUMAN

Protein Sequence

Download: Fasta

MGIQGGSVLF GLLLVLAVFC HSGHSLQCYN CPNPTADCKT AVNCSSDFDA CLITKAGLQV    60
YNKCWKFEHC NFNDVTTRLR ENELTYYCCK KDLCNFNEQL ENGGTSLSEK TVLLLVTPFL   120
AAAWSLHP                                                            128

cDNA Sequence

Download: Fasta

ATGGGAATCC AAGGAGGGTC TGTCCTGTTC GGGCTGCTGC TCGTCCTGGC TGTCTTCTGC    60
CATTCAGGTC ATAGCCTGCA GTGCTACAAC TGTCCTAACC CAACTGCTGA CTGCAAAACA   120
GCCGTCAATT GTTCATCTGA TTTTGATGCG TGTCTCATTA CCAAAGCTGG GTTACAAGTG   180
TATAACAAGT GTTGGAAGTT TGAGCATTGC AATTTCAACG ACGTCACAAC CCGCTTGAGG   240
GAAAATGAGC TAACGTACTA CTGCTGCAAG AAGGACCTGT GTAACTTTAA CGAACAGCTT   300
GAAAATGGTG GGACATCCTT ATCAGAGAAA ACAGTTCTTC TGCTGGTGAC TCCATTTCTG   360
GCAGCAGCCT GGAGCCTTCA TCCCTAA                                       387