Sequences for HUMAN03861

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene HUMAN03861 (TNNI2_HUMAN)

E Homo sapiens | Troponin I, fast skeletal muscle [TNNI2]

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Orthologs 319

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 804
Gene information
GO Annotations
Sequences/Isoforms 5
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	HUMAN03862	182			7	TNNI2_HUMAN
	HUMAN03863	182			6	ENSG00000130598.16
	HUMAN03864	182			7	TNNI2_HUMAN
	HUMAN03865	182			6	TNNI2_HUMAN
	HUMAN03861 reference isoform	182			7	TNNI2_HUMAN

Protein Sequence

Download: Fasta

MGDEEKRNRA ITARRQHLKS VMLQIAATEL EKEESRREAE KQNYLAEHCP PLHIPGSMSE    60
VQELCKQLHA KIDAAEEEKY DMEVRVQKTS KELEDMNQKL FDLRGKFKRP PLRRVRMSAD   120
AMLKALLGSK HKVCMDLRAN LKQVKKEDTE KERDLRDVGD WRKNIEEKSG MEGRKKMFES   180
ES                                                                  182

cDNA Sequence

Download: Fasta

ATGGGAGATG AGGAGAAGCG GAACAGGGCC ATCACGGCCC GCAGGCAGCA CCTGAAGAGT    60
GTGATGCTGC AGATAGCGGC CACGGAGCTG GAGAAGGAGG AGAGCCGCCG TGAGGCAGAG   120
AAGCAGAACT ACCTGGCGGA GCACTGCCCG CCGCTGCATA TCCCGGGCTC CATGTCTGAA   180
GTGCAGGAGC TCTGCAAACA GCTGCACGCC AAGATCGATG CGGCTGAAGA GGAGAAGTAC   240
GACATGGAGG TGAGGGTGCA GAAGACCAGC AAGGAGCTGG AGGACATGAA CCAGAAGCTA   300
TTTGATCTGC GGGGCAAGTT CAAGCGGCCC CCACTGCGGA GGGTGCGCAT GTCGGCCGAT   360
GCCATGCTCA AGGCCCTGCT GGGCTCGAAG CACAAGGTGT GCATGGACCT GAGGGCCAAC   420
CTGAAGCAGG TCAAGAAGGA GGACACAGAG AAGGAGCGGG ACCTGCGAGA CGTGGGTGAC   480
TGGAGGAAGA ACATCGAGGA GAAGTCTGGC ATGGAGGGCC GGAAGAAGAT GTTTGAGTCC   540
GAGTCCTAG                                                           549