Sequences for GORGO17889

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene GORGO17889 (G3RJI3)

E Gorilla gorilla gorilla | Succinate dehydrogenase [ubiquinone] iron-sulfur s [SDHB]

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Orthologs 2936

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 109
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	GORGO17889 reference isoform	280			8	G3RJI3

Protein Sequence

Download: Fasta

MAAVVALSLR RRLPATTLGG ACLQASRGAQ TAAATAPRIK KFAIYRWDPD KAGDKPHMQT    60
YEVDLNKCGP MVLDALIKIK NEVDSTLTFR RSCREGICGS CAMNINGGNT LACTRRIDTN   120
LNKVSKIYPL PHMYVIKDLV PDLSNFYAQY KSIEPYLKKK DESQEGKQQY LQSIEEREKL   180
DGLYECILCA CCSTSCPSYW WNGDKYLGPA VLMQAYRWMI DSRDDFTEER LAKLQDPFSL   240
YRCHTIMNCT RTCPKGLNPG KAIAEIKKMM ATYKEKKASV                         280

cDNA Sequence

Download: Fasta

ATGGCGGCGG TGGTCGCACT CTCCTTGAGG CGCCGGTTAC CGGCCACAAC CCTTGGCGGA    60
GCCTGCCTGC AGGCCTCCCG AGGAGCCCAG ACAGCTGCAG CCACTGCTCC CCGTATCAAG   120
AAATTTGCCA TCTATCGATG GGACCCAGAC AAGGCTGGAG ACAAACCTCA TATGCAGACT   180
TATGAAGTTG ACCTTAATAA ATGTGGCCCC ATGGTATTGG ATGCTTTAAT CAAGATTAAG   240
AATGAAGTTG ACTCTACTTT GACCTTCCGA AGATCATGCA GAGAAGGCAT CTGTGGCTCT   300
TGTGCAATGA ACATCAATGG AGGCAACACT CTAGCTTGCA CCCGAAGGAT TGACACCAAC   360
CTCAATAAGG TCTCAAAAAT CTACCCTCTT CCACACATGT ATGTGATAAA GGATCTTGTT   420
CCCGATTTGA GCAACTTCTA TGCACAGTAC AAATCCATTG AGCCTTATTT GAAGAAGAAG   480
GATGAATCTC AGGAAGGCAA GCAGCAGTAT CTGCAGTCCA TAGAAGAGCG TGAGAAACTG   540
GACGGGCTCT ACGAGTGCAT TCTCTGTGCC TGCTGTAGCA CCAGCTGCCC CAGCTACTGG   600
TGGAACGGAG ACAAATATCT GGGGCCTGCA GTTCTTATGC AGGCCTATCG CTGGATGATT   660
GACTCCAGAG ACGACTTCAC AGAGGAGCGC CTGGCCAAGC TGCAGGACCC ATTCTCTCTA   720
TACCGCTGCC ACACCATCAT GAACTGCACA AGGACCTGTC CTAAGGGTCT GAATCCAGGG   780
AAAGCTATTG CGGAGATCAA GAAAATGATG GCAACCTATA AGGAGAAGAA AGCTTCAGTT   840
TAA                                                                 843