Sequences for FELCA17857

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene FELCA17857 (A0A337S5N4)

E Felis catus | Ceramide-1-phosphate transfer protein [CPTP]

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Orthologs 597

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 506
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	FELCA17857 reference isoform	214			2	A0A337S5N4

Protein Sequence

Download: Fasta

MGDLESDFNL KVVLVSFKQC LNEKEEVLLD HYLAGWRGLV RFLNSLGAIF SFISKDVTTK    60
LQIMERLCSG PQQEHYSSLQ SMMAYEVGNR LVDLERRSQH PDSGCRTVLR LHRALRWLQL   120
FLEGLRTSPE DARTAVLCTD SYNASLAAYH PWIIRRAVTV AFCTLPTRKV FLEAMNVGSP   180
EQAVEMLGEA LPFIERVYDV SQKLYTEHSL LNLP                               214

cDNA Sequence

Download: Fasta

ATGGGCGACC TGGAGTCGGA CTTCAACCTG AAAGTTGTCT TAGTCAGTTT CAAGCAGTGT    60
CTCAACGAGA AGGAGGAGGT GCTGCTGGAT CACTACCTCG CTGGCTGGAG GGGGCTGGTC   120
AGGTTCCTGA ACAGCCTGGG TGCCATCTTC TCCTTCATCT CTAAGGATGT CACCACAAAG   180
CTACAGATCA TGGAGCGTCT GTGCAGTGGC CCACAGCAGG AGCACTACAG CAGCCTGCAG   240
TCCATGATGG CCTACGAGGT GGGCAACCGG CTGGTGGACC TCGAGCGTCG TTCCCAGCAC   300
CCCGACTCAG GCTGCCGGAC GGTGCTCCGG CTGCACCGCG CCCTGCGCTG GCTACAGCTC   360
TTCCTGGAAG GTCTGCGCAC CAGCCCCGAG GACGCGCGTA CTGCCGTGCT CTGCACCGAC   420
TCCTACAACG CCTCTCTGGC TGCCTACCAC CCCTGGATCA TCCGCCGGGC CGTCACCGTG   480
GCCTTCTGTA CGTTGCCCAC ACGCAAGGTC TTCCTGGAGG CCATGAACGT GGGGTCCCCA   540
GAGCAGGCCG TGGAAATGCT GGGCGAGGCC CTGCCCTTCA TTGAGCGTGT CTACGATGTC   600
TCCCAGAAAC TCTACACTGA GCATTCCCTG CTGAACCTGC CCTGA                   645