Sequences for EQUAS29220

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene EQUAS29220 (A0A8C4PRM3)

E Equus asinus asinus | Prostaglandin-H2 D-isomerase [PTGDS]

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Orthologs 213

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	EQUAS29220 reference isoform	194			6	A0A8C4PRM3

Protein Sequence

Download: Fasta

MAASHTLWMG LVLLGVLGVL QTRAQAQPSL QPNFQQDKFL GRWFTSGLAS NSSWFREKKK    60
VLSMCTSVVA PTADGGFNLT STFLRKDQCE TRTLLLQPAG PPGCYSYTSP HWGMVHEVSV   120
VETDYEEYAL LYTHAESTKG LGGQDFRMAT LYSRVQSPRP EVKEKFSTFA KAQGFTEDAI   180
VFLPQTDKCM EEHN                                                     194

cDNA Sequence

Download: Fasta

ATGGCTGCTT CACACACGCT GTGGATGGGG TTGGTCCTGC TGGGGGTCCT GGGGGTCCTG    60
CAGACCCGAG CCCAGGCCCA GCCCTCCCTG CAGCCCAACT TCCAACAGGA CAAGTTCCTG   120
GGCCGCTGGT TCACCTCGGG CCTGGCCTCC AACTCGAGCT GGTTCCGGGA GAAGAAGAAG   180
GTGCTGTCCA TGTGCACGTC GGTGGTGGCC CCGACCGCAG ACGGCGGCTT CAACCTCACC   240
TCTACCTTCC TCAGGAAAGA CCAGTGTGAG ACCCGGACCC TGCTGCTGCA GCCGGCCGGA   300
CCCCCAGGCT GCTATAGCTA CACGAGTCCC CACTGGGGCA TGGTCCATGA GGTGTCAGTG   360
GTAGAGACGG ACTATGAGGA GTACGCTCTG CTCTACACCC ACGCCGAGAG CACCAAAGGC   420
CTGGGCGGCC AGGACTTCCG CATGGCCACC CTCTACAGCC GTGTGCAGAG CCCGAGGCCT   480
GAGGTGAAGG AGAAATTCAG CACCTTCGCC AAAGCCCAGG GCTTCACAGA GGATGCCATT   540
GTCTTCTTGC CACAGACCGA TAAGTGCATG GAGGAGCACA ATTAG                   585