Sequences for DROER11719

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene DROER11719 (B3NE63)

E Drosophila erecta | Pupal cuticle protein Edg-78E [Dere\GG16170]

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Orthologs 27

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	DROER11719 reference isoform	140			2	B3NE63

Protein Sequence

Download: Fasta

MRNFLIGLFL LALIWVEADA RLVRVRRIRR LVGASERDAQ ITDFRVSPLD DEGVFKYAFK    60
TSNGIDVKAA GSALETIGIY SYTSPEGVPI ETRYIADELG FHVVGRHLPQ PPPTPDYILR   120
SLEYIRTHTE DGKLKKPHFL                                               140

cDNA Sequence

Download: Fasta

ATGCGAAATT TTCTAATTGG CCTTTTCTTG TTGGCCCTCA TTTGGGTGGA GGCTGATGCC    60
CGCCTGGTGA GGGTTCGCCG GATCCGGAGA TTGGTCGGCG CCAGTGAGCG GGATGCTCAG   120
ATAACGGACT TCCGGGTTTC GCCCTTGGAT GACGAAGGAG TGTTTAAGTA TGCCTTCAAG   180
ACCAGCAATG GGATCGATGT AAAAGCGGCA GGATCTGCGC TGGAGACCAT TGGCATCTAT   240
AGCTACACCT CACCGGAGGG CGTTCCCATC GAGACGCGCT ACATAGCCGA TGAACTGGGC   300
TTCCATGTAG TGGGTCGACA TCTGCCGCAG CCACCGCCCA CTCCGGACTA TATCCTGCGA   360
TCCTTGGAAT ATATTCGCAC ACATACTGAG GATGGCAAGC TGAAGAAGCC GCACTTCTTG   420
TGA                                                                 423