Sequences for CRYPA01382

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CRYPA01382 (Crypa1.gw1.2.1420.1)

E Cryphonectria parasitica

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Orthologs 5606

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 453
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CRYPA01382 reference isoform	284			4	Crypa1.gw1.2.1420.1

Protein Sequence

Download: Fasta

SPRVEWKSLT REQKAEVLRL PWSQWMNSEV KNHFVASLGE FVGTTMFLFF AFAGTEVANI    60
QSDANGGVTG FNIGVQLYIA LAFGFSLMVN VWVFFRVSGG LFNPAVTLAM LMIRAIKPAR   120
AVCLFLAQIA GAILASVLVR NLFPVNFNVR TTLTGGASIA QGLFIEALLT AELVFTIYML   180
AAEKHRATFI APVGIGLALF IAEMAGVQFT GGSLNPARSF GPCVATATFD QDHWIYWVGP   240
GLGTCIAWLF YRFIKILEYE MANPGADGDP HNDPTKNPEK RAEL                    284

cDNA Sequence

Download: Fasta

TCGCCGCGCG TGGAGTGGAA GTCCCTGACC AGGGAACAAA AAGCCGAGGT GCTGCGCCTG    60
CCGTGGTCGC AGTGGATGAA CTCGGAGGTG AAGAACCATT TTGTGGCCAG CCTGGGGGAG   120
TTTGTGGGGA CTACCATGTT TCTGTTCTTT GCTTTTGCTG GGACCGAGGT TGCTAATATC   180
CAGTCGGATG CCAATGGTGG CGTGACTGGA TTCAACATTG GCGTCCAGCT CTACATTGCC   240
CTTGCTTTTG GCTTTTCCCT CATGGTCAAC GTCTGGGTCT TCTTCCGAGT CAGCGGCGGC   300
CTCTTCAACC CAGCCGTAAC CCTAGCCATG CTCATGATCC GCGCCATCAA GCCGGCCCGC   360
GCCGTCTGCC TCTTCCTCGC CCAGATCGCC GGCGCCATCC TCGCCTCCGT GCTGGTCCGC   420
AACCTGTTCC CCGTCAACTT CAACGTCCGC ACCACCCTGA CAGGCGGCGC CAGCATCGCC   480
CAGGGCCTCT TCATCGAGGC CCTCCTCACC GCCGAGCTCG TCTTCACCAT CTACATGCTC   540
GCCGCCGAGA AACACCGCGC CACCTTCATC GCGCCCGTCG GCATCGGCCT GGCGCTCTTC   600
ATCGCCGAGA TGGCCGGCGT GCAGTTTACC GGCGGCAGTC TGAACCCGGC GCGGTCGTTT   660
GGGCCTTGTG TGGCCACGGC TACGTTTGAT CAGGACCACT GGATTTATTG GGTGGGACCG   720
GGCCTCGGGA CTTGTATTGC CTGGTTGTTT TACCGCTTCA TCAAGATTCT TGAATATGAG   780
ATGGCTAATC CTGGCGCTGA CGGTGATCCG CACAACGATC CCACCAAGAA TCCCGAGAAA   840
AGGGCAGAGT TANNN                                                    855