Sequences for CRIGR10315

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

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Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CRIGR10315 (A0A8C2M087)

E Cricetulus griseus | Elongation of very long chain fatty acids protein [Elovl1]

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Orthologs 886

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 609
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CRIGR10315 reference isoform	279			7	A0A8C2M087

Protein Sequence

Download: Fasta

MEAVTNLYQE LMKHADPRIQ NYPLMGSPLL ITSILLTYVY FVLSLGPRIM ANRKPFQLRG    60
FMIVYNFSLV TLSLYIVYEF LMSGWLSTYT WRCDPVDYSN SPEALRMVRV AWLFMLSKVI   120
ELMDTVIFIL RKKDGQVTFL HVFHHSVLPW SWWWGIKIAP GGMGSFHAMI NSSVHVVMYL   180
YYGLSALGPV AQPYLWWKKH MTAIQLIQFV LVSLHISQYY FMPSCNYQYP VIIHLIWMYG   240
TIFFVLFSNF WYHSYTKGKR LPRAVQQNGT PAITKVKAN                          279

cDNA Sequence

Download: Fasta

ATGGAGGCTG TTACGAACTT GTATCAGGAA TTGATGAAGC ATGCAGATCC CCGGATCCAG    60
AACTACCCTC TGATGGGGTC ACCCTTGTTA ATTACATCCA TCCTTCTGAC CTATGTGTAC   120
TTTGTCCTCT CACTTGGGCC TCGAATCATG GCTAATCGGA AGCCCTTCCA ACTTCGTGGC   180
TTCATGATTG TCTACAATTT CTCACTGGTG ACACTCTCCC TCTACATTGT CTATGAGTTC   240
TTAATGTCTG GTTGGCTGAG TACCTACACC TGGCGCTGTG ACCCTGTGGA TTATTCCAAT   300
AGTCCTGAGG CACTTCGGAT GGTTCGAGTG GCCTGGCTCT TCATGCTTTC CAAGGTCATT   360
GAGCTGATGG ACACTGTGAT ATTTATTCTC CGGAAGAAAG ACGGGCAGGT GACCTTCCTA   420
CATGTCTTCC ATCACTCAGT GCTTCCCTGG AGCTGGTGGT GGGGGATAAA GATTGCTCCA   480
GGAGGAATGG GCTCTTTCCA TGCCATGATA AATTCCTCTG TACATGTTGT CATGTACCTG   540
TACTATGGAT TGTCTGCCCT TGGTCCTGTG GCTCAGCCTT ACCTTTGGTG GAAAAAACAT   600
ATGACAGCCA TCCAGCTGAT CCAGTTTGTC CTGGTCTCAC TGCACATCAG CCAATACTAC   660
TTCATGCCCA GCTGCAACTA CCAGTATCCC GTCATTATCC ACCTCATCTG GATGTATGGC   720
ACCATCTTCT TTGTGCTCTT CTCCAATTTC TGGTATCACT CTTACACTAA GGGAAAGCGG   780
CTGCCCCGTG CTGTTCAGCA AAATGGAACT CCAGCTATCA CCAAGGTCAA GGCCAACTGA   840