Sequences for CRIGR02322

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CRIGR02322 (G3GWI1)

E Cricetulus griseus | Pancreas/duodenum homeobox protein 1 [Pdx1]

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Orthologs 158

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CRIGR02322 reference isoform	283			2	G3GWI1

Protein Sequence

Download: Fasta

MNGEEQYYAA TQLYKDPCAF QRGPVPEFSA NPPACLYMGR QPPPPPPPQF AGALGTLEQG    60
SPQDISPYEV PPLAEDPSVA HLHHHLPAQL GLTHPPSGPF PNGTEPGGLE EPSRVQLPFP   120
WMKSTKAHAW KGQWAGGAYA VEPEENKRTR TAYTRAQLLE LEKEFLFNKY ISRPRRVELA   180
VMLNLTERHI KIWFQNRRMK WKKEEDKKRS SGTASGGGGG EEPEQDSAVT SGEELLALPP   240
PPPPGGAVPP GVPAAAREGR LPPGLSASPQ PSSIAPRRLQ EPR                     283

cDNA Sequence

Download: Fasta

ATGAACGGTG AGGAGCAGTA CTATGCGGCC ACACAGCTCT ACAAGGATCC TTGCGCATTC    60
CAGAGGGGCC CGGTGCCAGA GTTCAGCGCT AACCCCCCTG CGTGCCTGTA CATGGGCCGC   120
CAGCCCCCAC CTCCGCCGCC ACCCCAGTTC GCAGGGGCTC TGGGGACACT GGAGCAGGGA   180
AGTCCCCAGG ACATCTCCCC GTACGAAGTG CCCCCGCTCG CTGAAGACCC TTCGGTGGCC   240
CACCTCCACC ACCACCTCCC AGCTCAGCTC GGGCTCACCC ACCCGCCCTC CGGCCCTTTC   300
CCGAATGGAA CAGAGCCTGG GGGCCTGGAA GAACCCAGCC GCGTTCAGCT CCCTTTCCCG   360
TGGATGAAAT CCACCAAAGC TCATGCGTGG AAAGGCCAGT GGGCAGGCGG TGCATACGCA   420
GTGGAACCGG AGGAGAACAA GCGGACCCGC ACAGCCTACA CGCGGGCGCA GCTGCTGGAG   480
CTGGAGAAAG AATTCTTATT TAACAAATAC ATATCCCGGC CTCGCCGGGT GGAGCTGGCA   540
GTGATGCTCA ACCTGACCGA GAGACACATC AAGATCTGGT TCCAAAACCG TCGCATGAAG   600
TGGAAGAAGG AGGAAGATAA AAAGCGAAGT AGCGGGACGG CGAGCGGGGG AGGTGGGGGC   660
GAAGAGCCAG AACAGGATAG TGCGGTGACC TCGGGCGAGG AGCTGCTGGC CTTGCCGCCG   720
CCGCCTCCTC CCGGTGGTGC TGTGCCCCCA GGCGTCCCCG CTGCAGCCAG GGAGGGCCGC   780
CTGCCTCCAG GCCTTAGCGC ATCACCACAG CCTTCCAGCA TCGCACCTCG GCGACTGCAA   840
GAACCTCGGT GA                                                       852