Sequences for CORMO20623

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CORMO20623 (A0A8C3EVT6)

E Corvus moneduloides | Inositol oxygenase [MIOX]

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Orthologs 851

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 5
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CORMO20623 reference isoform	268			9	A0A8C3EVT6

Protein Sequence

Download: Fasta

DPGVGGVGFG GFGCTEGMLI DRVYKTYLLM HTHQTVEFVR RKSAQYGSCS LRRMSAMEAL    60
ELLDQLVDES DPDVDFPNSF HAFQTAEGIR RAHPDKDWFH LVGLLHDLGK VLVLFGEPQW   120
AVVGDTFPVG CKVQKSVVYG DSTFHDNPDT KDPRYSTEYG MYQPGCGLEN VLMSWGHDEY   180
MYQVMKFNNF ALPKEAFYMV RFHSFYPWHA HGDYGHLCSE EDRRMLPWVR ELNKFDLYTK   240
QEELPDVQQL RAYYQGLIDK YCPGQLCW                                      268

cDNA Sequence

Download: Fasta

GACCCCGGGG TGGGCGGGGT GGGGTTCGGG GGGTTCGGCT GCACGGAGGG GATGCTGATC    60
GACCGCGTGT ACAAGACCTA CCTGCTCATG CACACCCACC AGACCGTGGA GTTCGTCCGC   120
AGGAAGAGCG CGCAGTACGG CTCGTGCTCG CTGCGGAGGA TGAGCGCCAT GGAGGCGCTG   180
GAGCTGCTGG ATCAGCTCGT GGACGAGTCG GACCCCGACG TGGATTTCCC CAACTCCTTC   240
CACGCCTTCC AGACGGCCGA GGGGATCCGC CGGGCGCACC CCGACAAAGA CTGGTTCCAC   300
CTCGTGGGGC TCCTGCACGA TCTGGGCAAG GTGCTGGTGC TGTTCGGGGA GCCCCAGTGG   360
GCCGTGGTCG GGGACACCTT CCCGGTGGGC TGCAAGGTGC AGAAGTCGGT GGTCTATGGG   420
GACTCCACCT TCCACGACAA CCCCGACACC AAAGACCCCC GGTACAGCAC CGAGTACGGG   480
ATGTACCAGC CCGGCTGCGG CCTGGAGAAC GTCCTCATGT CCTGGGGCCA CGATGAGTAC   540
ATGTACCAAG TGATGAAGTT CAACAACTTC GCCCTGCCCA AGGAGGCTTT CTACATGGTT   600
CGCTTCCACT CCTTCTACCC GTGGCACGCC CACGGCGACT ACGGCCACCT GTGCTCCGAG   660
GAGGACCGGC GCATGCTGCC CTGGGTCCGG GAGCTCAACA AGTTCGACCT GTACACCAAG   720
CAGGAGGAGC TGCCCGACGT GCAGCAGCTC CGCGCTTACT ACCAGGGCCT CATCGACAAA   780
TACTGCCCGG GGCAGCTCTG CTGGTGA                                       807