Sequences for CORMO13674

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CORMO13674 (A0A851WPU2)

E Corvus moneduloides | Gamma-interferon-inducible lysosomal thiol reducta [Ifi30]

‹

Orthologs 620

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 335
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CORMO13674 reference isoform	256			7	A0A851WPU2

Protein Sequence

Download: Fasta

MAPTVPLAVL ALVALVAPGL GVAPGCDYPA HRWCSSRDAA VACQVESSCP SLPRPAAAPV    60
ELGLYYESLC PACREFLVME LFSTWLLLPE EMLDITLVPY GNAQERNVSG RLDFECQHGP   120
EECLGNMIEA CLMHEAKNFS TYFPVIFCLE SGSSVTKNLE ACLQIYAPEL DSGRIAACVQ   180
GDTGVALMHR NAQLTEALDP PHQYVPWITV NGKHTSELQA QAQASLLGLV CQLYQGEKPE   240
ACGGSKAPKI PAGCRR                                                   256

cDNA Sequence

Download: Fasta

ATGGCCCCCA CGGTGCCGCT GGCTGTCCTG GCGCTGGTGG CCCTGGTGGC CCCGGGACTC    60
GGGGTGGCCC CCGGCTGTGA TTACCCTGCC CACCGCTGGT GCAGCTCGCG GGACGCCGCC   120
GTCGCCTGCC AGGTGGAGAG CAGCTGCCCC AGCCTCCCGC GCCCCGCGGC CGCGCCCGTG   180
GAGCTGGGCC TGTACTACGA GAGCCTGTGC CCGGCGTGCC GCGAGTTCCT GGTCATGGAG   240
CTCTTCTCCA CCTGGCTGCT GCTGCCCGAA GAGATGCTCG ACATCACCCT GGTGCCCTAT   300
GGCAACGCCC AGGAGAGGAA CGTCAGTGGG AGGTTGGACT TCGAGTGCCA GCACGGCCCC   360
GAGGAATGTT TGGGCAACAT GATCGAGGCC TGTCTGATGC ACGAGGCCAA GAACTTCAGC   420
ACCTACTTCC CCGTCATCTT CTGCCTGGAG TCGGGCAGCT CCGTCACCAA GAACCTGGAG   480
GCTTGCCTGC AGATCTACGC CCCGGAGCTG GACAGCGGCC GCATCGCCGC CTGCGTGCAG   540
GGGGACACGG GGGTGGCCCT GATGCACCGC AACGCCCAAC TCACCGAGGC CCTGGACCCC   600
CCCCACCAGT ACGTGCCCTG GATCACCGTC AATGGGAAGC ACACCAGCGA GCTGCAGGCA   660
CAGGCACAGG CCTCGCTGCT GGGGCTGGTT TGCCAGCTCT ACCAGGGGGA GAAGCCCGAA   720
GCCTGTGGGG GCTCAAAGGC ACCGAAGATC CCAGCTGGCT GCAGGCGCTG A            771