Sequences for CORMM03480

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CORMM03480 (A0A4P8J7W6)

E Cordyceps militaris (strain CM01) | Fibrinolytic enzyme | Trypsin-like serine protease [FE]

‹

Orthologs 10590

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 149
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CORMM03480 reference isoform	252			1	A0A4P8J7W6

Protein Sequence

Download: Fasta

MRNQLALVAL ASQAAAFAVP SVATRSEAIV GGVSVKIEDF PYQVDLRVND RANCGGTVIS    60
EKYVLTAGHC AEGYTGLNIR VGSATNGKGT NYNVTRAVVH PKYNSESYAY DAAILEISPA   120
IKFGTTVKAI ALADVEPAVG TDTVVSGWGS LTETPNYPTA LQAVHVPIYN RATCKTNYAS   180
VTPITADMIC AGFPEGKKDS CSGDSGGPLV TGGKVVGIVS FGTGCARANK PGVYSSVASA   240
EIRSFIKSTT GL                                                       252

cDNA Sequence

Download: Fasta

ATGAGAAACC AACTCGCCCT CGTCGCCCTC GCCAGCCAGG CGGCCGCCTT TGCTGTCCCT    60
TCCGTCGCCA CCAGGAGTGA GGCGATTGTG GGCGGCGTGT CTGTCAAGAT CGAGGACTTC   120
CCCTACCAGG TGGACCTGCG CGTCAACGAC AGGGCCAACT GCGGCGGCAC CGTCATCAGC   180
GAGAAATACG TCCTGACGGC CGGCCACTGC GCCGAGGGCT ACACGGGCCT GAACATTCGC   240
GTTGGCAGCG CCACCAACGG CAAGGGCACC AACTACAACG TCACCCGGGC CGTCGTCCAC   300
CCCAAGTACA ACTCCGAGTC GTACGCCTAC GACGCCGCCA TTCTGGAGAT CAGCCCGGCC   360
ATCAAGTTCG GCACCACGGT CAAGGCCATT GCCCTGGCCG ACGTGGAGCC CGCCGTCGGC   420
ACCGACACGG TCGTCTCCGG CTGGGGCTCC CTCACCGAGA CACCCAACTA CCCCACGGCC   480
CTCCAGGCCG TCCACGTCCC CATCTACAAC CGCGCCACCT GCAAGACGAA CTACGCCAGC   540
GTCACCCCAA TCACGGCCGA CATGATCTGC GCTGGCTTCC CTGAAGGCAA GAAGGATTCT   600
TGCTCTGGCG ACAGCGGCGG TCCTCTGGTG ACTGGCGGCA AGGTTGTTGG CATCGTCTCT   660
TTCGGAACTG GCTGTGCTCG GGCCAATAAA CCCGGCGTTT ACTCCAGCGT CGCCAGCGCT   720
GAGATTCGTT CCTTCATCAA GAGCACGACT GGCCTGTAA                          759