Sequences for CHILA23252

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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CHILA23252 (A0A8C2URJ1)

E Chinchilla lanigera | Chromatin target of PRMT1 [CHTOP]

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Orthologs 225

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 19
Gene information
GO Annotations
Sequences/Isoforms 2
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CHILA23253	203			4	A0A8C2YJX5
	CHILA23252 reference isoform	249			5	A0A8C2URJ1

Protein Sequence

Download: Fasta

MAAQSAPKVV LKSTTKMSLN ERFTNMLKNK QPMPVNIRAS MQQQQQLASA RNRRLAQQME    60
NRPSVQAALK LKQKSLKQRL GKSNIQARLG RPIGALARGA IGGRGLPIVQ RGLPRGGLRG   120
ARATRTLLRG GMSLRGQNLL RGGRAVAPRM GLRRGGVRGR GGPGRGGLGR GAMGRGGIGG   180
RGRGMIGRGR GGFGGRGRGR GRGRGALTRP VLTKEQLDNQ LDAYMSKTKG HLDAELDAYM   240
AQTDPETND                                                           249

cDNA Sequence

Download: Fasta

ATGGCTGCCC AGTCAGCGCC GAAAGTTGTG CTAAAAAGCA CCACCAAGAT GTCTCTAAAT    60
GAGCGCTTTA CTAATATGCT GAAGAACAAA CAGCCGATGC CAGTGAATAT TCGGGCTTCG   120
ATGCAGCAAC AACAGCAGCT AGCCAGTGCC AGAAACAGAA GACTGGCCCA GCAGATGGAG   180
AATAGACCCT CTGTCCAGGC AGCATTAAAA CTTAAGCAGA AGAGCTTAAA GCAGCGCCTG   240
GGTAAGAGTA ACATCCAGGC ACGGTTAGGC CGACCCATAG GGGCCCTGGC CAGGGGAGCC   300
ATTGGAGGAC GAGGCCTGCC CATAGTCCAG AGAGGCTTGC CCAGAGGAGG ACTGCGTGGG   360
GCACGCGCCA CCAGAACCCT TCTTAGGGGC GGGATGTCGC TCCGAGGTCA AAACCTGCTT   420
CGAGGTGGAC GAGCCGTAGC TCCCCGAATG GGCTTAAGAA GAGGTGGTGT TCGAGGTCGT   480
GGAGGTCCTG GGAGAGGGGG CCTAGGGCGT GGAGCTATGG GTCGTGGCGG AATCGGTGGT   540
AGAGGTCGGG GTATGATAGG TCGGGGAAGA GGGGGCTTTG GAGGACGAGG ACGAGGACGT   600
GGACGGGGAA GAGGCGCCCT TACTCGCCCT GTATTGACCA AGGAGCAGCT GGACAACCAA   660
TTGGATGCCT ACATGTCGAA AACTAAAGGA CACCTGGATG CTGAGTTGGA TGCCTACATG   720
GCACAGACAG ATCCTGAAAC CAATGATTGA                                    750