Sequences for CHILA17226

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CHILA17226 (A0A8C2V8Q3)

E Chinchilla lanigera | Lysozyme g-like protein [LYG2]

‹

Orthologs 238

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 101
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CHILA17226 reference isoform	211			5	A0A8C2V8Q3

Protein Sequence

Download: Fasta

MLPSIVLVGL TALIGTSRGS YPFPHALRPH LHPRLYHGCY GDITTMETSG VRCDITNLLS    60
CGIRGSEMFA DMDLNSIRPY QTLIKEVSQR YCVDPALIAA IISRESHGGT VLQRGWDHKG   120
LKFGLMQLDK SIHPTGAWDS KEHLSQGVGI LAENIKVIQR KFPMWSVDQH LKGGLSAFKS   180
GAEAIAAPED IDSNYVDDVI ARARFYKTHG F                                  211

cDNA Sequence

Download: Fasta

ATGTTGCCCT CTATCGTGCT CGTGGGACTT ACTGCTCTCA TTGGCACGAG CAGGGGCTCC    60
TACCCTTTCC CTCATGCGCT GCGGCCCCAC CTGCACCCCC GCCTGTACCA CGGCTGCTAC   120
GGGGACATCA CCACCATGGA GACCTCGGGG GTGCGCTGCG ACATCACCAA CCTGCTCAGC   180
TGCGGGATCC GTGGTTCTGA AATGTTTGCC GACATGGATC TGAACTCCAT AAGACCCTAC   240
CAGACTCTGA TCAAAGAAGT GAGCCAGAGG TACTGCGTGG ACCCTGCGCT CATCGCGGCC   300
ATCATCTCCA GAGAGAGCCA CGGCGGCACC GTCCTGCAGC GTGGCTGGGA CCACAAGGGC   360
CTGAAGTTCG GCCTGATGCA GCTGGATAAA AGTATCCACC CGACCGGCGC CTGGGACAGC   420
AAAGAACACC TTTCGCAGGG TGTGGGGATT CTAGCAGAAA ACATTAAGGT GATCCAGAGA   480
AAATTCCCCA TGTGGAGTGT GGATCAGCAC CTCAAAGGTG GTCTCTCTGC CTTTAAGTCA   540
GGAGCCGAAG CTATTGCTGC CCCGGAAGAT ATTGACTCTA ACTACGTAGA TGACGTGATT   600
GCTCGAGCCC GATTCTATAA AACCCATGGC TTCTAG                             636