Sequences for CHEAB22004

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CHEAB22004 (A0A8C0J6D0)

E Chelonoidis abingdonii | Phosphatidylinositol glycan anchor biosynthesis cl [PIGC]

‹

Orthologs 585

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 106
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CHEAB22004 reference isoform	297			2	A0A8C0J6D0

Protein Sequence

Download: Fasta

IYTPPPHNTR ISCWQKVLYE RQPFPDNYVD HRFLEELRKN IYARKYQYWA VVFESGVVIQ    60
QLCSVCVFVV IWWYMDDGLL TPQWLFGAGL ASSLIGYILF DVIDLGVGRK ESGRTRWADL   120
KSTLVFIAFT YGFSPVLKTL TESISTDTIY AMSVLMLLGH LIFFDYGANA AIVSSTLSLN   180
MAIFASVCLA SRLPRSLHTF AMVTFAIQIF ALWPMLQKKL KARTPCCYVG VTLLFALSAL   240
AGLLTISGVA ALLFGLLLVS ISCLCPYCLI RLQLLKDNIH GPWDEAEIKD DLSRFLM      297

cDNA Sequence

Download: Fasta

ATCTATACAC CCCCACCCCA CAACACTCGG ATCTCTTGCT GGCAGAAGGT GCTGTATGAG    60
AGGCAGCCCT TCCCAGATAA CTATGTGGAC CACCGGTTCC TGGAGGAGCT GCGGAAGAAC   120
ATCTACGCCC GCAAGTACCA GTATTGGGCA GTGGTGTTTG AGTCCGGGGT GGTGATTCAA   180
CAGCTGTGCA GCGTCTGCGT CTTTGTTGTC ATCTGGTGGT ACATGGATGA TGGGCTGCTG   240
ACCCCACAGT GGCTGTTCGG GGCTGGCCTG GCCTCTTCCC TGATTGGCTA CATCCTGTTT   300
GATGTCATAG ACTTGGGGGT GGGGAGGAAA GAGAGCGGTC GGACCCGGTG GGCGGACCTG   360
AAGAGCACTT TGGTGTTCAT AGCTTTCACC TATGGCTTCT CCCCGGTGCT GAAGACCCTG   420
ACGGAGTCGA TCAGCACAGA TACCATCTAC GCCATGTCAG TCCTCATGCT TCTGGGGCAC   480
CTGATCTTCT TCGACTATGG GGCTAATGCC GCCATCGTCT CCAGCACGCT GTCCCTCAAC   540
ATGGCCATCT TCGCCTCCGT GTGCCTGGCC TCTCGGCTGC CCCGCTCCCT GCACACCTTC   600
GCCATGGTCA CCTTTGCCAT CCAGATCTTT GCCCTGTGGC CCATGCTGCA GAAGAAGCTC   660
AAAGCGCGGA CACCCTGCTG CTATGTGGGG GTGACCCTGC TCTTCGCCCT GTCTGCGCTG   720
GCTGGGCTTC TGACCATCTC AGGCGTCGCC GCTCTTCTCT TTGGCCTTCT GCTGGTCTCC   780
ATTTCATGCC TGTGTCCTTA CTGCCTCATC CGGCTGCAGC TGCTCAAAGA CAACATCCAT   840
GGGCCTTGGG ATGAAGCTGA AATCAAGGAC GACCTCTCCA GGTTCCTAAT GTAG         894