Sequences for CARSF29738

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene CARSF29738 (A0A1U7TW08)

E Carlito syrichta | Lysozyme-like protein 6 [LYZL6]

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Orthologs 121

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 1
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	CARSF29738 reference isoform	148			4	A0A1U7TW08

Protein Sequence

Download: Fasta

MTKVLLFALV SCILTQNQAN LIGRCDLAKV LHEEDMDGFE GYSLSDWLCL AFVESSFNIS    60
KVNENVDGSS DYGLFQINSH YWCNDYRSHT KNLCQVDCQE MLNPNLLSGL SCAKKIVSGA   120
EGMNSWMAWK LHCSGRPLSY WMTGCRLG                                      148

cDNA Sequence

Download: Fasta

ATGACAAAGG TGCTACTTTT CGCGTTGGTC AGCTGCATCC TCACCCAGAA TCAGGCCAAC    60
CTCATTGGGC GCTGTGACCT GGCCAAGGTG TTGCATGAGG AGGATATGGA TGGCTTTGAG   120
GGCTACTCCC TGAGCGACTG GCTGTGCCTG GCCTTTGTGG AGAGCAGTTT CAACATCTCC   180
AAGGTGAACG AAAATGTAGA CGGCAGCTCT GACTATGGCC TCTTCCAGAT CAACAGCCAC   240
TACTGGTGCA ACGATTACAG GAGCCACACG AAGAACCTGT GTCAAGTGGA CTGTCAAGAA   300
ATGCTGAATC CTAACCTTCT CTCAGGCCTC TCCTGTGCAA AAAAGATTGT GTCTGGAGCA   360
GAGGGCATGA ACAGCTGGAT GGCATGGAAG CTGCACTGTT CAGGCCGACC ACTCTCCTAC   420
TGGATGACAG GCTGCCGCCT GGGCTGA                                       447