Sequences for BRADI02956

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene BRADI02956 (I1GV00)

E Brachypodium distachyon | Tetraspanin [100828466]

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Orthologs 109

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 2
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	BRADI02956 reference isoform	241			6	I1GV00

Protein Sequence

Download: Fasta

MARRPQNGGC VRCCLGFLLK FLAFLQAFAA VSALLYAAWI LSRWSRHHHL HLHHLLPDLW    60
FACAVMAAGL FYCALLLAGY VAAEINSGCC LCFYTALAMA MMLVEAAFAS QIFLNQQWIQ   120
DLPYDRTGEL NNLVSFVQNN LDVCKWAAIA TLATQALSLF LAMVLRAMVS TTNVDYDSDE   180
DFVVIRRPLL LAQGAPAYLP TTTDATGVHP DLWSSRMRQK YGLNSSDYTY NTLDQNAVPP   240
Q                                                                   241

cDNA Sequence

Download: Fasta

ATGGCTCGTC GTCCTCAGAA CGGCGGATGC GTCCGCTGCT GCCTCGGCTT CCTGCTCAAG    60
TTCCTCGCCT TCCTCCAGGC CTTCGCCGCC GTCTCCGCCC TCCTCTACGC CGCCTGGATC   120
CTCTCCCGCT GGTCCCGCCA CCACCACCTC CACCTCCACC ACCTCCTCCC CGACCTCTGG   180
TTCGCGTGCG CCGTCATGGC AGCCGGCCTC TTCTACTGCG CCCTCCTCCT CGCCGGATAC   240
GTCGCCGCCG AGATCAACAG CGGATGCTGC CTATGCTTCT ACACCGCCTT GGCGATGGCC   300
ATGATGCTCG TTGAAGCGGC TTTCGCCTCC CAGATCTTCC TCAACCAACA ATGGATCCAG   360
GATCTGCCGT ATGACCGCAC CGGAGAACTC AACAACCTCG TTTCCTTCGT CCAGAACAAT   420
CTCGATGTCT GCAAGTGGGC TGCTATTGCA ACTCTTGCTA CACAGGCACT CTCGCTTTTC   480
TTGGCAATGG TTTTACGAGC CATGGTTTCC ACCACCAATG TCGACTATGA CAGTGATGAA   540
GACTTTGTGG TCATCAGGAG GCCGCTTCTT CTTGCCCAAG GTGCTCCAGC TTATCTACCA   600
ACGACCACCG ACGCTACAGG CGTCCATCCG GACCTATGGA GCTCCAGAAT GAGACAAAAG   660
TATGGACTGA ACTCGAGCGA CTACACCTAC AACACATTAG ATCAAAATGC AGTACCACCG   720
CAGTGA                                                              726