Sequences for BACSU04042

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Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene BACSU04042 (P04957)

B Bacillus subtilis (strain 168) | Beta-glucanase [bglS]

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Orthologs 113

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	BACSU04042 reference isoform	242			1	P04957

Protein Sequence

Download: Fasta

MPYLKRVLLL LVTGLFMSLF AVTATASAQT GGSFFDPFNG YNSGFWQKAD GYSNGNMFNC    60
TWRANNVSMT SLGEMRLALT SPAYNKFDCG ENRSVQTYGY GLYEVRMKPA KNTGIVSSFF   120
TYTGPTDGTP WDEIDIEFLG KDTTKVQFNY YTNGAGNHEK IVDLGFDAAN AYHTYAFDWQ   180
PNSIKWYVDG QLKHTATNQI PTTPGKIMMN LWNGTGVDEW LGSYNGVNPL YAHYDWVRYT   240
KK                                                                  242

cDNA Sequence

Download: Fasta

ATGCCTTATC TGAAACGAGT GTTGCTGCTT CTTGTCACTG GATTGTTTAT GAGTTTGTTT    60
GCAGTCACTG CTACTGCCTC AGCTCAAACA GGTGGATCGT TTTTTGACCC TTTTAACGGC   120
TATAACTCCG GTTTTTGGCA AAAAGCAGAT GGTTATTCGA ATGGAAATAT GTTCAACTGC   180
ACGTGGCGGG CTAATAACGT ATCAATGACG TCATTGGGTG AAATGCGTTT AGCGCTAACA   240
AGCCCAGCTT ATAACAAGTT TGACTGCGGG GAAAACCGTT CTGTTCAAAC ATATGGCTAT   300
GGACTTTATG AAGTCAGAAT GAAACCAGCT AAAAACACAG GGATCGTTTC ATCGTTCTTC   360
ACTTACACAG GTCCAACAGA TGGAACTCCT TGGGATGAGA TTGATATCGA ATTTTTAGGA   420
AAAGACACAA CGAAGGTTCA ATTTAACTAT TATACAAATG GTGCAGGAAA CCATGAGAAG   480
ATTGTTGATC TCGGGTTTGA TGCAGCCAAT GCCTATCATA CGTATGCATT CGATTGGCAG   540
CCAAACTCTA TTAAATGGTA TGTCGACGGG CAATTAAAAC ATACTGCAAC AAACCAAATT   600
CCGACAACAC CTGGAAAGAT CATGATGAAC TTGTGGAATG GCACGGGTGT CGATGAATGG   660
CTTGGCTCCT ACAATGGTGT AAATCCGCTA TACGCTCATT ATGACTGGGT GCGCTATACA   720
AAAAAATAA                                                           729