Sequences for ATHCN16216

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For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
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Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ATHCN16216 (A0A663MC22)

E Athene cunicularia | Catechol O-methyltransferase [COMT]

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Orthologs 508

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 429
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	ATHCN16216 reference isoform	267			5	A0A663MC22

Protein Sequence

Download: Fasta

MLLNLMLESS SLLLFIVFVL LFILLLFVVL IRKNGTAALI WNEIIREKIT NFIMNQSKEQ    60
RILNFVLQNA VRGDPCSVLD TIDKYCSQKE WAMNVGNEKG LILDKTVEEA NPSVALELGT   120
YCGYSAVRIA RLLKAGAHLL TVEFNPEFAA IAKQMIEFAG VQDKVKLLEG PSEEIIPQLK   180
KKYEVDTLDF VFLDHWKDRY TPDTILLQEC NLLRKGSVLL ADNVIVPGAP EFLNYIRNNP   240
HFQCTNYPSH LEYMKVEDAM EKAVFLG                                       267

cDNA Sequence

Download: Fasta

ATGCTGCTCA ATCTGATGCT GGAGAGCTCT TCACTCCTTT TGTTCATTGT CTTCGTCCTG    60
CTTTTCATTT TGCTGCTCTT TGTGGTGCTC ATCAGGAAAA ACGGCACTGC TGCCCTTATC   120
TGGAATGAAA TAATCCGGGA AAAAATAACC AATTTCATCA TGAATCAGAG CAAAGAACAG   180
AGGATTTTAA ATTTTGTGCT GCAGAATGCA GTCCGAGGAG ACCCCTGTAG TGTGCTGGAC   240
ACTATAGATA AGTACTGCTC CCAGAAAGAG TGGGCCATGA ATGTGGGCAA TGAGAAAGGT   300
TTAATTCTAG ACAAGACAGT GGAAGAGGCC AATCCATCAG TTGCCCTGGA GCTGGGAACA   360
TACTGTGGCT ACTCAGCAGT TAGGATTGCT CGGCTCCTGA AGGCAGGAGC TCATCTTCTC   420
ACTGTGGAGT TCAACCCAGA ATTTGCTGCT ATAGCTAAAC AGATGATTGA GTTCGCTGGA   480
GTACAAGATA AGGTAAAACT CCTAGAAGGC CCTTCAGAGG AAATTATTCC CCAGCTGAAG   540
AAAAAATACG AAGTGGATAC TCTGGATTTT GTCTTCCTGG ACCACTGGAA AGACAGATAC   600
ACACCAGACA CCATCCTGCT TCAGGAATGC AACTTACTGA GGAAGGGATC AGTTCTTCTG   660
GCTGACAATG TCATCGTCCC AGGAGCTCCA GAATTCCTTA ACTATATCCG CAACAACCCC   720
CATTTCCAAT GCACTAACTA CCCATCTCAT CTGGAATATA TGAAAGTGGA GGATGCTATG   780
GAAAAGGCTG TGTTTTTGGG ATAA                                          804