Sequences for ASTMX10907

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ASTMX10907 (A0A8B9KNX8)

E Astyanax mexicanus | Purine nucleoside phosphorylase [LOC103033869]

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Orthologs 1506

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 418
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	ASTMX10907 reference isoform	292			6	A0A8B9KNX8

Protein Sequence

Download: Fasta

MSASSSSSSS SQCSYTYEEY KETVDWLLAN THIRPKVAII CGTGLGGLAD LLENKNVFPY    60
KDIPRFPRST VEGHAGQLVF GELKGKQCVC MQGRFHFYEG YSIATVTYPV RVFFLLGVEV   120
LIVTNAAGGI NPTFNVGDIM MIKDHLNLPG FAGQNPLCGQ NDARFGERFP CMSDAYNKDL   180
AQLTRETAEE QSCACFLRQG VYCMLAGPSF ETIAECRMLH QLGADAVGMS TVPEVVVARH   240
CGLRVLGLSL ITNKVVCDYD SDEHANHDEV LEIGRMRTKD LQRLVSHVVA KI           292

cDNA Sequence

Download: Fasta

ATGTCTGCAT CCAGCAGCAG CAGCAGCAGC AGCCAGTGCA GTTATACGTA TGAGGAATAC    60
AAAGAGACAG TGGACTGGTT GCTAGCTAAT ACACACATCC GACCCAAAGT GGCAATCATC   120
TGTGGCACAG GCCTCGGTGG ACTGGCTGAC TTGCTGGAAA ACAAGAACGT GTTTCCTTAT   180
AAGGACATTC CCCGATTCCC TCGCAGTACA GTGGAAGGGC ATGCGGGTCA GCTGGTCTTC   240
GGGGAGCTGA AAGGGAAGCA GTGTGTGTGC ATGCAGGGCC GCTTTCACTT CTATGAGGGC   300
TACAGCATTG CTACAGTAAC GTACCCAGTG CGTGTGTTCT TCCTTCTTGG AGTGGAGGTC   360
CTGATCGTCA CAAATGCTGC CGGAGGGATA AACCCCACTT TTAATGTGGG AGATATTATG   420
ATGATCAAGG ACCACCTTAA CTTACCAGGG TTTGCAGGCC AGAATCCTCT GTGTGGCCAA   480
AATGATGCGA GGTTTGGTGA GCGTTTTCCC TGTATGTCAG ACGCATATAA TAAAGACTTG   540
GCTCAGCTGA CCAGAGAGAC AGCTGAGGAG CAGAGCTGTG CCTGTTTCCT CCGGCAGGGA   600
GTCTACTGCA TGCTGGCTGG ACCCAGCTTC GAGACCATAG CGGAGTGTAG AATGCTTCAC   660
CAGCTAGGGG CTGATGCAGT GGGGATGAGC ACAGTTCCTG AAGTGGTTGT GGCGCGTCAC   720
TGTGGCCTGC GTGTCCTCGG CCTCTCCCTC ATCACCAACA AGGTAGTGTG TGACTATGAC   780
AGCGACGAGC ACGCCAACCA CGACGAGGTG CTGGAGATCG GCCGCATGCG CACCAAAGAC   840
CTCCAGCGGC TGGTCAGTCA CGTGGTGGCT AAGATCTAG                          879