Sequences for ASTMX02671

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Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
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HOGs	hog, sequence
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Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

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There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

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To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Gene ASTMX02671 (A0A8B9LHP1)

E Astyanax mexicanus | Inositol-1-monophosphatase [IMPA2]

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Orthologs 3098

Required orthology evidence:

OMA pairs ?

HOG ?

OMA Group ?
Paralogs 1207
Gene information
GO Annotations
Sequences/Isoforms 1
Local synteny

	Protein ID	Sequence length	Exons	Domain Architectures	Number exons	Cross reference
	ASTMX02671 reference isoform	279			8	A0A8B9LHP1

Protein Sequence

Download: Fasta

MEAESWAECL ELAVRIARSA GQMVQEAVKQ EKSVSSKSTP TDLVTEADQQ VEDLIISTLR    60
ERFPSHRFIG EESSATGEKC VLTDSPTWII DPIDGTCNFV HSFPMVAVSI GFAVKKELEF   120
GVIYHCFDGT LYMARRGHGA FCNGVRLRVS QEKDVSKSLI LTEIGAKRDP NTLEIFLGNM   180
KKLLSAPVHG VRIIGSSTLA LCHIASGAAE AYYQYGLHCW DIAAAAVIIR EAGGCVIDTT   240
GGPLDLMSRR VVAAGTREIA DYIVQQLQPI NYGRDDHDP                          279

cDNA Sequence

Download: Fasta

ATGGAGGCGG AGAGCTGGGC CGAGTGTCTG GAGCTGGCCG TGCGGATCGC TCGCTCTGCG    60
GGGCAGATGG TTCAGGAAGC TGTGAAACAG GAGAAGAGCG TGAGCAGTAA GAGCACACCC   120
ACAGACCTGG TGACGGAGGC TGACCAGCAG GTGGAGGACC TCATCATCTC CACCCTCAGG   180
GAGAGGTTCC CCTCACACAG GTTTATTGGA GAGGAATCTT CTGCTACTGG AGAGAAGTGT   240
GTTCTGACTG ATAGTCCTAC CTGGATAATA GATCCTATTG ATGGCACTTG TAACTTCGTT   300
CACAGTTTTC CCATGGTTGC AGTCAGCATT GGCTTTGCAG TAAAGAAAGA GCTGGAGTTT   360
GGAGTCATAT ATCACTGTTT TGATGGAACT CTGTACATGG CCAGGAGAGG CCACGGGGCG   420
TTTTGCAATG GAGTACGGCT GCGAGTTTCG CAGGAGAAGG ATGTGTCCAA ATCTCTCATT   480
CTGACGGAGA TCGGAGCAAA GAGGGATCCC AACACTTTAG AGATCTTTCT GGGCAACATG   540
AAGAAACTGC TGAGTGCCCC TGTCCATGGG GTGAGAATCA TAGGCAGCTC TACTTTAGCA   600
CTGTGTCACA TAGCCAGCGG AGCGGCCGAG GCCTACTACC AGTACGGCCT TCACTGCTGG   660
GACATCGCCG CAGCCGCAGT CATCATCAGG GAGGCGGGCG GCTGTGTGAT CGACACCACA   720
GGTGGTCCTC TAGATCTCAT GTCCCGCCGG GTGGTGGCTG CCGGGACCCG AGAGATAGCG   780
GATTACATCG TCCAGCAACT CCAACCAATC AACTACGGGC GTGACGATCA TGACCCCTGA   840