OMA group 918929 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 918929 with 17 members.

Fingerprint: QPHTHNN | Histone-lysine N-methyltransferase H3 lysine-9 specific

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Members 17

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Hordeum vulgare subsp. vulgare	HORVV188595	HORVU0Hr1G001190
E	Triticum aestivum	WHEAT09530	A0A3B5Z115
E	Triticum turgidum subsp. durum	TRITD05299	A0A9R0R476
E	Magnolia sinica	MAGSI21065	XP_058106825
E	Aristolochia fimbriata	ARIFI07859	H6P81_007859
E	Chenopodium quinoa	CHEQI20240	A0A803N6E8
E	Glycine max	SOYBN21718	GLYMA_15G224400
E	Phaseolus vulgaris	PHAVU04043	V7AJ31
E	Lupinus angustifolius	LUPAN12136	A0A1J7FN19
E	Populus trichocarpa	POPTR32567	B9GXL1
E	Brassica rapa subsp. pekinensis	BRARP04530	M4EJ11
E	Brassica napus	BRANA89421	BnaC09g50300D
E	Brassica oleracea var. oleracea	BRAOL05484	A0A0D3AHU2
E	Arabidopsis thaliana	ARATH32063	SUVH1_ARATH
E	Gossypium hirsutum	GOSHI39694	XP_040950568
E	Eucalyptus grandis	EUCGR38033	A0A059A874
E	Nymphaea colorata	NYMNZ04024	XP_049932974

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