OMA group 782403 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 782403 with 25 members.

Fingerprint: PWQYQRI | Speedy/RINGO cell cycle regulator family member E4

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Members 25

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Loxodonta africana	LOXAF20348	G3TKC4
E	Oryctolagus cuniculus	RABIT17199	ENSOCUG00000024978.2
E	Ochotona princeps	OCHPR12271	ENSOPRG00000010993
E	Cavia aperea	CAVAP10116	ENSCAPG00000009708.1
E	Chinchilla lanigera	CHILA15195	A0A8C2VDH9
E	Cricetulus griseus	CRIGR01794	ENSCGRG00000010949.1
E	Mus musculus	MOUSE47005	Q8CDE8
E	Rattus norvegicus	RATNO05747	Q3KR78
E	Ictidomys tridecemlineatus	ICTTR04366	ENSSTOG00000000412
E	Cercocebus atys	CERAT16844	A0A2K5LTJ6
E	Macaca fascicularis	MACFA13015	A0A2K5TMF6
E	Mandrillus leucophaeus	MANLE20791	A0A2K5YNK1
E	Homo sapiens	HUMAN31719	SPDE4_HUMAN
E	Callithrix jacchus	CALJA26408	A0A2R8N6B4
E	Saimiri boliviensis boliviensis	SAIBB38999	A0A2K6TF79
E	Carlito syrichta	CARSF30911	ENSTSYG00000003926.2
E	Bos taurus	BOVIN20996	ENSBTAG00000040014.3
E	Ovis aries	SHEEP12669	W5NX93
E	Sus scrofa	PIGXX20206	ENSSSCG00000032257.1
E	Balaenoptera musculus	BALMU21863	A0A8C0DTB2
E	Canis lupus familiaris	CANLF20425	A0A8C0S226
E	Mustela putorius furo	MUSPF03824	M3YYT7
E	Equus caballus	HORSE07512	F7BYP6
E	Manis javanica	MANJA12830	XP_036867758
E	Choloepus hoffmanni	CHOHO02031	ENSCHOG00000007592

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