OMA group 1416744 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1416744 with 270 members.

Fingerprint: YVFHSVD | PAN2-PAN3 deadenylation complex subunit pan3

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Members 270

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Dictyostelium purpureum	DICPU10529	F1A1A4
E	Guillardia theta	GUITH16113	EKX46528
E	Guillardia theta (strain CCMP2712)	GUITC09139	L1JDB0
E	Leishmania donovani (strain BPK282A1)	LEIDB01737	E9BNI0
E	Leishmania infantum	LEIIN02131	A0A6L0XXR4
E	Leishmania major strain Friedlin	LEIMA04890	Q4Q5L0
E	Leishmania mexicana (strain MHOM/GT/2001/U1103)	LEIMU05232	E9B2J6
E	Leishmania braziliensis	LEIBR01761	A4HK53
E	Leptomonas pyrrhocoris	LEPPY01807	A0A0M9G853
E	Leptomonas seymouri	LEPSE01911	A0A0N1I9X4
E	Trypanosoma vivax (strain Y486)	TRYVY02773	ERJ75_000298600
E	Trypanosoma rangeli	TRYRA04247	A0A422NJH8
E	Trypanosoma cruzi (strain CL Brener)	TRYCC16826	Q4CT66
E	Neolecta irregularis (strain DAH-3)	NEOID01045	A0A1U7LNQ1
E	Pneumocystis murina (strain B123)	PNEMU00342	M7NQK7
E	Schizosaccharomyces japonicus (strain yFS275 / FY16936)	SCHJY00668	B6K186
E	Protomyces lactucaedebilis	PROLT01110	A0A1Y2FQM3
E	Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804)	SAICN00195	A0A0E9N824
E	Dactylellina haptotyla (strain CBS 200.50)	DACHA03038	S8BPH7
E	Pyronema omphalodes (strain CBS 100304)	PYROM07043	U4LCG0
E	Tuber melanosporum (strain Mel28)	TUBMM00505	D5G594
E	Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656)	EXODN05476	H6C0D8
E	Exophiala mesophila	EXOME03940	A0A0D1X2B4
E	Endocarpon pusillum (strain Z07020 / HMAS-L-300199)	ENDPU05326	U1FYA2
E	Aspergillus brasiliensis (strain CBS 101740 / IMI 381727 / IBT 21946)	ASPBC03247	A0A1L9URI5

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