OMA group 1405216 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1405216 with 83 members.

Fingerprint: DMKNCAM | sema domain transmembrane domain TM and cytoplasmic domain semaphorin

‹

Members 83

Filter by Taxonomy:
All Taxa
Eukaryota
Viridiplantae
Fungi
Metazoa
Vertebrata
Arthropoda
Bacteria
Archaea
Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Anabas testudineus	ANATE04473	A0A3Q1IFG7
E	Seriola dumerili	SERDU09005	A0A3B4TAE5
E	Echeneis naucrates	ECHNA18926	A0A665U410
E	Dicentrarchus labrax	DICLA49142	A0A8P4FWK9
E	Mola mola	MOLML27387	A0A3Q3X2Z9
E	Takifugu rubripes	TAKRU05497	A0A674MQK9
E	Tetraodon nigroviridis	TETNG15424	H3C3V1
E	Oryzias latipes	ORYLA01610	ENSORLG00000001218
E	Oryzias melastigma	ORYME30837	A0A3B3BUQ5
E	Nothobranchius furzeri	NOTFU28290	A0A9D2XZH2
E	Cyprinodon variegatus	CYPVA06826	A0A3Q2CGP1
E	Gambusia affinis	GAMAF23127	ENSGAFG00000000458.1
E	Poecilia formosa	POEFO14079	A0A087Y001
E	Poecilia reticulata	POERE03895	A0A3P9PX04
E	Xiphophorus maculatus	XIPMA05877	A0A3B5R892
E	Salarias fasciatus	SALFA48167	A0A672FKX4
E	Astatotilapia calliptera	ASTCA21870	A0A3P8PE60
E	Haplochromis burtoni	HAPBU30001	A0A3Q3CYJ6
E	Oreochromis aureus	OREAU41528	A0A668RS68
E	Amphilophus citrinellus	AMPCI26992	A0A3Q0R4H5
E	Amphiprion ocellaris	AMPOC20022	A0A3Q1B3X8
E	Amphiprion percula	AMPPE26252	A0A3P8SVI4
E	Hippocampus comes	HIPCM24945	A0A3Q3D8K9
E	Esox lucius	ESOLU28945	A0A3P8YLR7
E	Salmo salar	SALSA33254	A0A1S3M2L7

Showing 1 to 25 of 83 rows rows per page