OMA group 1404963 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1404963 with 25 members.

Fingerprint: NCCKFER | intermediate chain

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Members 25

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Marssonina brunnea f. sp. multigermtubi (strain MB_m1)	MARBU00170	K1X7I4
E	Thermothelomyces thermophilus	THETO00172	estExt_Genewise1.C_c
E	Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799)	MYCTT06510	G2Q0U0
E	Coprinopsis cinerea	COPCI04533	CC1G_06941T0
E	Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003)	COPC712865	A8NZS2
E	Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565)	CRYNJ05957	Q5KBU1
E	Malassezia globosa (strain ATCC MYA-4612 / CBS 7966)	MALGO03273	A8Q9N9
E	Oryzias latipes	ORYLA09868	ENSORLG00000017316
E	Salmo salar	SALSA38028	ENSSSAG00000040455.2
E	Salmo trutta	SALTR61512	A0A674A283
E	Pygocentrus nattereri	PYGNA05421	A0A3B4EAW4
E	Cyprinus carpio carpio	CYPCA46353	A0A9J7YDD5
E	Sinocyclocheilus grahami	SINGR44297	A0A672T8S9
E	Danio rerio	DANRE44904	DCI2A_DANRE
E	Meloidogyne hapla	MELHA07651	A0A1I8BII8
E	Stegodyphus mimosarum	STEMI05815	A0A087TTA5
E	Strigamia maritima	STRMM08906	T1IUZ0
E	Drosophila melanogaster	DROME29460	B5RJJ8
E	Echinococcus granulosus	ECHGR07575	U6J251
E	Echinococcus multilocularis	ECHMU07234	A0A068Y7Y7
E	Taenia multiceps	TAEMU09025	Tm3G009198
E	Nematostella vectensis	NEMVE13141	A7RI29
E	Hydra vulgaris	HYDVU07441	T2ME57
E	Bigelowiella natans (strain CCMP2755)	BIGNC16505	JGI_V11_80459
E	Plasmodiophora brassicae	PLABS04744	A0A0G4ILI2

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