OMA group 1399438 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1399438 with 33 members.

Fingerprint: DYHINIR | RNA helicase

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Members 33

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Seriola dumerili	SERDU22340	A0A3B4TVN9
E	Cynoglossus semilaevis	CYNSE18032	A0A3P8V8L1
E	Dicentrarchus labrax	DICLA35576	A0A8P4GB45
E	Gasterosteus aculeatus	GASAC18241	G3Q7K1
E	Sparus aurata	SPAAU08571	A0A671YUI2
E	Oryzias javanicus	ORYJA47401	ENSOJAG00000013382.1
E	Oryzias melastigma	ORYME21118	A0A3B3D4H3
E	Salarias fasciatus	SALFA21815	A0A672JAK1
E	Astatotilapia calliptera	ASTCA27593	A0A3P8N8N2
E	Haplochromis burtoni	HAPBU19036	A0A3Q3BQ23
E	Neolamprologus brichardi	NEOBR07127	A0A3Q4H5J3
E	Oreochromis aureus	OREAU08978	A0A668W5S0
E	Oreochromis niloticus	ORENI52044	A0A669C349
E	Amphilophus citrinellus	AMPCI05896	A0A3Q0RQ66
E	Gadus morhua	GADMO21511	A0A8C4ZIF9
E	Esox lucius	ESOLU70728	A0A3P8YU91
E	Salmo salar	SALSA137367	A0A1S3SJP0
E	Cyprinus carpio carpio	CYPCA05909	A0A8C1JKL3
E	Sinocyclocheilus grahami	SINGR46948	A0A672P0A3
E	Microcebus murinus	MICMU14986	ENSMICG00000015414
E	Erinaceus europaeus	ERIEU06506	ENSEEUG00000004763
E	Ciona intestinalis	CIOIN14042	F6YDG7
E	Nippostrongylus brasiliensis	NIPBR21693	A0A0N4YWS0
E	Diaphorina citri	DIACI11865	LOC103514948
E	Chlamydomonas reinhardtii	CHLRE13440	Cre03.g182950.t1.1

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