OMA group 1379452 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1379452 with 103 members.

Fingerprint: KNSRECM | mex-3 RNA binding family member

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Members 103

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Anguilla anguilla	ANGAN14505	XP_035269923
E	Anabas testudineus	ANATE27138	ENSATEG00000015620.1
E	Seriola dumerili	SERDU14388	A0A3B4USL6
E	Echeneis naucrates	ECHNA34320	A0A665X222
E	Cynoglossus semilaevis	CYNSE18465	A0A3P8W6F1
E	Scophthalmus maximus	SCOMX29265	ENSSMAG00000003087.1
E	Dicentrarchus labrax	DICLA00949	XP_051262957
E	Gasterosteus aculeatus	GASAC09030	G3PRD9
E	Sparus aurata	SPAAU37373	A0A671WWZ4
E	Tetraodon nigroviridis	TETNG05326	H3DCZ5
E	Oryzias javanicus	ORYJA28900	ENSOJAG00000023936.1
E	Oryzias latipes	ORYLA06857	ENSORLG00000015223
E	Oryzias melastigma	ORYME25589	A0A3B3DW75
E	Kryptolebias marmoratus	KRYMA14699	A0A3Q3F5M8
E	Gambusia affinis	GAMAF09737	ENSGAFG00000008425.1
E	Poecilia formosa	POEFO16991	A0A087Y5W8
E	Poecilia reticulata	POERE12145	A0A3P9PWH8
E	Xiphophorus maculatus	XIPMA30992	A0A3B5RB30
E	Salarias fasciatus	SALFA33896	A0A672HTD6
E	Astatotilapia calliptera	ASTCA16406	A0A3P8NHY0
E	Haplochromis burtoni	HAPBU06921	A0A3Q2W3W6
E	Neolamprologus brichardi	NEOBR06662	A0A3Q4HVP3
E	Oreochromis aureus	OREAU33702	A0A668RQE7
E	Oreochromis niloticus	ORENI26848	A0A669EFD4
E	Amphilophus citrinellus	AMPCI18496	A0A3Q0SLZ5

Showing 1 to 25 of 103 rows rows per page