OMA group 1377092 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1377092 with 103 members.

Fingerprint: DHCILND | testis expressed 49

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Members 103

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Branchiostoma floridae	BRAFL36342	A0A9J7KDD9
E	Branchiostoma lanceolatum	BRALA00413	A0A8J9YTH5
E	Lepisosteus oculatus	LEPOC12532	W5MKZ2
E	Dicentrarchus labrax	DICLA31775	XP_051280009
E	Nothobranchius furzeri	NOTFU24212	A0A1A8VH70
E	Danio rerio	DANRE23906	ENSDARG00000096897.2
E	Latimeria chalumnae	LATCH16769	M3XIZ9
E	Ornithorhynchus anatinus	ORNAN01020	K7EDF2
E	Tachyglossus aculeatus	TACAU11784	XP_038609240
E	Oryctolagus cuniculus	RABIT10288	ENSOCUG00000007390.2
E	Dipodomys ordii	DIPOR13294	ENSDORG00000023756.1
E	Fukomys damarensis	FUKDA18400	ENSFDAG00000017952.1
E	Heterocephalus glaber	HETGA01008	ENSHGLG00100019257.1
E	Cavia porcellus	CAVPO05505	A0A286XNP5
E	Chinchilla lanigera	CHILA20484	A0A8C2UVP7
E	Octodon degus	OCTDE16701	A0A6P6F4N4
E	Jaculus jaculus	JACJA20420	A0A8C5KNG9
E	Mus musculus	MOUSE16250	Q8CDT5
E	Rattus norvegicus	RATNO38384	A6KC90
E	Nannospalax galili	NANGA24099	A0A8C6W432
E	Ictidomys tridecemlineatus	ICTTR08361	I3M3M8
E	Cercocebus atys	CERAT25240	A0A2K5L6X3
E	Chlorocebus sabaeus	CHLSB02140	A0A0D9R1Q6
E	Macaca fascicularis	MACFA03010	ENSMFAG00000041881.1
E	Macaca mulatta	MACMU04892	A0A5F8A9J9

Showing 1 to 25 of 103 rows rows per page