OMA group 1352129 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1352129 with 19 members.

Fingerprint: GTHDYAG | choline-phosphate cytidylyltransferase

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Members 19

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Branchiostoma floridae	BRAFL28409	A0A9J7M263
E	Branchiostoma lanceolatum	BRALA05973	BL09622
E	Scyliorhinus torazame	SCYTO01508	A0A401PDS7
E	Anguilla anguilla	ANGAN32840	XP_035288293
E	Cynoglossus semilaevis	CYNSE21372	A0A3P8VP82
E	Dicentrarchus labrax	DICLA18810	A0A8C4HRT3
E	Hippocampus comes	HIPCM24637	A0A3Q2XZX2
E	Esox lucius	ESOLU62360	A0A6Q2XFB7
E	Salmo salar	SALSA102031	A0A1S3QB29
E	Salmo trutta	SALTR96327	A0A673ZYT3
E	Ictalurus punctatus	ICTPU18226	ENSIPUG00000015440.1
E	Sinocyclocheilus grahami	SINGR03684	A0A672PYR8
E	Echinops telfairi	ECHTE16485	ENSETEG00000016765
E	Ochotona princeps	OCHPR07171	ENSOPRG00000010414
E	Cavia aperea	CAVAP13272	ENSCAPG00000005430.1
E	Sorex araneus	SORAR11199	ENSSARG00000008349
E	Xenopus laevis	XENLA09694	A0A1L8H5W4
E	Blomia tropicalis	BLOTA00189	A0A9Q0MA55
E	Drosophila suzukii	DROSZ13293	XP_016934091

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