OMA group 1352094 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1352094 with 62 members.

Fingerprint: YKEPAPF | superfamily member 18

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Members 62

Filter by Taxonomy:
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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Procavia capensis	PROCA05935	ENSPCAG00000007319
E	Echinops telfairi	ECHTE08478	ENSETEG00000011520
E	Oryctolagus cuniculus	RABIT02984	ENSOCUG00000021634.2
E	Ochotona princeps	OCHPR05565	ENSOPRG00000015666
E	Fukomys damarensis	FUKDA17793	ENSFDAG00000006736.1
E	Heterocephalus glaber	HETGA05758	ENSHGLG00100006115.1
E	Cavia aperea	CAVAP05203	ENSCAPG00000015081.1
E	Cavia porcellus	CAVPO07141	H0VIT5
E	Jaculus jaculus	JACJA10280	A0A8C5LNZ4
E	Cricetulus griseus	CRIGR03682	A0A8C2M1B9
E	Mus musculus	MOUSE28772	TNF18_MOUSE
E	Rattus norvegicus	RATNO07560	D4A3I1
E	Ictidomys tridecemlineatus	ICTTR17511	ENSSTOG00000010210
E	Cercocebus atys	CERAT36213	A0A2K5KLY5
E	Chlorocebus sabaeus	CHLSB12212	A0A0D9RH20
E	Macaca fascicularis	MACFA19787	A0A2K5UCD9
E	Macaca mulatta	MACMU24936	A0A0U5J4T7
E	Macaca nemestrina	MACNE02553	A0A2K6C130
E	Mandrillus leucophaeus	MANLE27284	A0A2K5YX09
E	Papio anubis	PAPAN18896	A0A096N1Q7
E	Colobus angolensis palliatus	COLAP11519	A0A2K5HNK8
E	Rhinopithecus bieti	RHIBE04382	A0A2K6LR22
E	Rhinopithecus roxellana	RHIRO04813	A0A2K6QUU6
E	Gorilla gorilla gorilla	GORGO18036	G3QSS7
E	Homo sapiens	HUMAN53605	Q9UNG2

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