OMA group 1347173 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1347173 with 113 members.

Fingerprint: VAIICKS | domain-containing protein

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Members 113

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Guillardia theta	GUITH02553	EKX32510
E	Guillardia theta (strain CCMP2712)	GUITC22796	L1I9I0
E	Pristionchus pacificus	PRIPA15257	WBGene00104965
E	Caenorhabditis brenneri	CAEBE07220	G0MBQ9
E	Caenorhabditis briggsae	CAEBR08719	A8XX99
E	Caenorhabditis elegans	CAEEL07292	C1P627
E	Caenorhabditis japonica	CAEJA04949	WBGene00124299
E	Caenorhabditis remanei	CAERE06838	E3N6L2
E	Toxocara canis	TOXCA10782	A0A0B2V861
E	Brugia malayi	BRUMA14236	A0A0I9NB96
E	Litomosoides sigmodontis	LITSI04904	nLs.2.1.2.g05031
E	Loa loa	LOALO06678	A0A1I7W349
E	Onchocerca volvulus	ONCVO03432	A0A2K6WEX1
E	Strongyloides ratti	STRRB09777	A0A090MYZ4
E	Meloidogyne hapla	MELHA12020	A0A1I8BVY4
E	Necator americanus	NECAM09245	W2TA41
E	Angiostrongylus costaricensis	ANGCS11184	A0A158PLC3
E	Haemonchus contortus	HAECO07803	A0A7I4Y9G1
E	Haemonchus placei	HAEPC10751	A0A0N4WIH3
E	Nippostrongylus brasiliensis	NIPBR19088	A0A0N4YPB6
E	Trichinella britovi	TRIBR04832	A0A0V1CJA5
E	Trichinella spiralis	TRISP08890	EFV52654
E	Tigriopus californicus	TIGCA11725	A0A553NRZ1
E	Lepeophtheirus salmonis	LEPSM10607	EMLSAG00000003781
E	Ectocarpus siliculosus	ECTSI08620	D8LLG4

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