OMA group 1343941 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1343941 with 25 members.

Fingerprint: YLMGGNR | inosine-uridine preferring nucleoside

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Members 25

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Oreochromis aureus	OREAU25761	A0A668SI14
E	Oreochromis niloticus	ORENI44071	I3KDI9
E	Caenorhabditis elegans	CAEEL17752	NSH1_CAEEL
E	Caenorhabditis japonica	CAEJA08104	WBGene00127555
E	Necator americanus	NECAM03912	W2TNP2
E	Haemonchus contortus	HAECO04057	W6NEH9
E	Orchesella cincta	ORCCI15982	A0A1D2MCH6
E	Bombyx mori	BOMMO03318	BGIBMGA003330-TA
E	Helicoverpa armigera	HELAM14852	LOC110370015
E	Danaus plexippus	DANPL11213	EHJ65320
E	Papilio machaon	PAPMA01895	XP_045542496
E	Anopheles stephensi	ANOST09744	A0A182YMR0
E	Anopheles gambiae	ANOGA12201	Q7Q185
E	Anopheles sinensis	ANOSI07918	A0A084W8P8
E	Anopheles darlingi	ANODA02995	W5JWY3
E	Aedes aegypti	AEDAE09841	Q16FL1
E	Aedes albopictus	AEDAL35736	AALFPA_043179
E	Culex quinquefasciatus	CULQU04822	B0XDW9
E	Apis mellifera	APIME12220	GB41779
E	Bombus impatiens	BOMIM05582	A0A6P8L582
E	Acromyrmex echinatior	ACREC04888	LOC105154426
E	Nasonia vitripennis	NASVI13181	NV18179
E	Trichogramma pretiosum	TRIPJ17858	XP_014225235
E	Acyrthosiphon pisum	ACYPI08815	ACYPI006571
E	Aplysia californica	APLCA13800	LOC124135027

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