OMA group 1341353 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1341353 with 143 members.

Fingerprint: YACCSPV | HPS4 biogenesis of lysosomal organelles complex

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Members 143

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Anguilla anguilla	ANGAN36366	XP_035235420
E	Anabas testudineus	ANATE11702	A0A3Q1IXG7
E	Seriola dumerili	SERDU06649	A0A3B4T4N0
E	Echeneis naucrates	ECHNA20665	A0A665T0R1
E	Cynoglossus semilaevis	CYNSE32469	A0A3P8VP73
E	Scophthalmus maximus	SCOMX32059	ENSSMAG00000018784.1
E	Dicentrarchus labrax	DICLA28517	XP_051279091
E	Gasterosteus aculeatus	GASAC14669	G3PGF7
E	Sparus aurata	SPAAU14821	A0A671XEX3
E	Mola mola	MOLML11238	A0A3Q3WA99
E	Takifugu rubripes	TAKRU30367	H2UXK0
E	Tetraodon nigroviridis	TETNG03433	H3D1N3
E	Oryzias javanicus	ORYJA44151	ENSOJAG00000021899.1
E	Oryzias latipes	ORYLA17891	ENSORLG00000014662
E	Oryzias melastigma	ORYME10612	A0A3B3DRQ4
E	Nothobranchius furzeri	NOTFU27214	A0A1A8BAW0
E	Kryptolebias marmoratus	KRYMA09372	A0A3Q3AG33
E	Cyprinodon variegatus	CYPVA23298	A0A3Q2CP32
E	Gambusia affinis	GAMAF16908	A0A315V8S0
E	Poecilia formosa	POEFO08710	A0A087Y5V0
E	Poecilia reticulata	POERE33025	A0A3P9Q7P7
E	Xiphophorus maculatus	XIPMA04132	M3ZL81
E	Salarias fasciatus	SALFA07957	A0A672JEB2
E	Astatotilapia calliptera	ASTCA04925	A0A3P8N6U1
E	Haplochromis burtoni	HAPBU17395	A0A3Q3C040

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