OMA group 1323533 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1323533 with 18 members.

Fingerprint: VVEYRHE | Alpha-1,4 glucan phosphorylase

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Members 18

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
B	Gallionella capsiferriformans (strain ES-2)	GALCS01688	Galf_1756
B	Sideroxydans lithotrophicus (strain ES-1)	SIDLE00975	Slit_0980
E	Eptatretus burgeri	EPTBU25458	A0A8C4QHM5
E	Scophthalmus maximus	SCOMX23916	A0A2U9B7Y8
E	Esox lucius	ESOLU19121	A0A6Q2YCH4
E	Salmo salar	SALSA116906	ENSSSAG00000079289.2
E	Salmo trutta	SALTR102860	A0A673XB67
E	Electrophorus electricus	ELEEL35348	A0A4W4HB01
E	Sinocyclocheilus grahami	SINGR47861	A0A672LI69
E	Melitaea cinxia	MELCN06410	MCINX005702
E	Drosophila obscura	DROOB02018	LOC111077020
E	Echinococcus granulosus	ECHGR04737	W6UB03
E	Aegilops tauschii	AEGTA27019	EMT25550
E	Aegilops tauschii subsp. strangulata	AEGTS22910	XP_020158230
E	Triticum aestivum	WHEAT58810	A0A3B6H1F9
E	Macadamia integrifolia	MACIN45955	XP_042491503
E	Gossypium hirsutum	GOSHI61154	A0A1U8MBE3
E	Diphasiastrum complanatum	DIPCM52390	O6H91_20G042200

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