OMA group 1317078 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1317078 with 72 members.

Fingerprint: LQIIHII | EamA domain-containing protein

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Members 72

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Physcomitrium patens	PHYPA06491	EDQ56014
E	Marchantia polymorpha	MARPO04753	A0A2R6W791
E	Ceratopteris richardii	CERRI54327	A0A8T2R7C7
E	Marsilea vestita	MARVE09863	Mvestita_S15g13265.1
E	Welwitschia mirabilis	WELMI21196	W.mirabilis.00926
E	Picea glauca	PICGL20051	PGL00020617
E	Amborella trichopoda	AMBTC08330	W1P7S8
E	Zostera marina	ZOSMR00326	A0A0K9PPG8
E	Asparagus officinalis	ASPOF13859	A0A5P1EPW0
E	Oryza brachyantha	ORYBR25362	J3MK12
E	Oryza glaberrima	ORYGL24037	I1Q9S7
E	Oryza punctata	ORYPU26620	A0A0E0LJD6
E	Oryza rufipogon	ORYRU31553	A0A0E0Q6P9
E	Oryza sativa subsp. indica	ORYSI30980	B8B568
E	Oryza sativa subsp. japonica	ORYSJ28289	B7EZJ3
E	Brachypodium distachyon	BRADI05121	I1H289
E	Aegilops tauschii subsp. strangulata	AEGTS10470	A0A453BAU7
E	Triticum aestivum	WHEAT34685	A0A2X0SMN3
E	Triticum turgidum subsp. durum	TRITD98717	A0A9R1NQ27
E	Miscanthus sinensis	MISSI27047	Misin05G210400.v7.1
E	Sorghum bicolor	SORBI19346	A0A1W0VZ22
E	Zea mays	MAIZE88770	A0A1D6G2F2
E	Setaria italica	SETIT18664	K3XJ76
E	Setaria viridis	SETVI32779	A0A4U6UIU4
E	Musa acuminata subsp. malaccensis	MUSAM26214	A0A804ILV8

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