OMA group 1300238 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1300238 with 63 members.

Fingerprint: RADNEDW | starch binding domain

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Members 63

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Procavia capensis	PROCA12768	ENSPCAG00000002570
E	Loxodonta africana	LOXAF10390	G3SYM0
E	Oryctolagus cuniculus	RABIT05300	ENSOCUG00000025567.1
E	Ochotona princeps	OCHPR08582	ENSOPRG00000002956
E	Dipodomys ordii	DIPOR10086	ENSDORG00000009454.2
E	Fukomys damarensis	FUKDA20491	ENSFDAG00000016217.1
E	Cavia porcellus	CAVPO02346	A0A286X9A0
E	Octodon degus	OCTDE25948	ENSODEG00000001188.1
E	Jaculus jaculus	JACJA16555	A0A8C5K531
E	Mus musculus	MOUSE45808	STBD1_MOUSE
E	Rattus norvegicus	RATNO09004	STBD1_RAT
E	Nannospalax galili	NANGA09500	A0A8C6R613
E	Ictidomys tridecemlineatus	ICTTR04120	I3MJG4
E	Cercocebus atys	CERAT13599	A0A2K5NS01
E	Chlorocebus sabaeus	CHLSB16457	A0A0D9QX76
E	Macaca nemestrina	MACNE18108	A0A2K6DW81
E	Mandrillus leucophaeus	MANLE04791	A0A2K5YWA0
E	Papio anubis	PAPAN28514	A0A8I5NAM2
E	Colobus angolensis palliatus	COLAP14688	A0A2K5JAR8
E	Rhinopithecus bieti	RHIBE07356	A0A2K6MIG7
E	Rhinopithecus roxellana	RHIRO29217	A0A2K6PJJ5
E	Gorilla gorilla gorilla	GORGO31935	G3R5D6
E	Homo sapiens	HUMAN76072	STBD1_HUMAN
E	Pan paniscus	PANPA30226	A0A2R9AWR4
E	Pan troglodytes	PANTR33689	H2QPQ7

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