OMA group 1119960 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1119960 with 15 members.

Fingerprint: ENQFLME | Cadherin domain-containing protein

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Members 15

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Salmo salar	SALSA139030	ENSSSAG00000058286.2
E	Salmo trutta	SALTR112330	A0A674CDP4
E	Cyprinus carpio carpio	CYPCA90302	A0A9J8CFP8
E	Homo sapiens	HUMAN103030	PC11Y_HUMAN
E	Pan troglodytes	PANTR48575	PC11X_PANTR
E	Tupaia belangeri	TUPBE06488	ENSTBEG00000000756
E	Mustela putorius furo	MUSPF00627	M3YF64
E	Sarcophilus harrisii	SARHA02845	ENSSHAG00000006395
E	Monodelphis domestica	MONDO36215	K7DZY1
E	Notamacropus eugenii	NOTEU06785	ENSMEUG00000007835
E	Phascolarctos cinereus	PHACI23539	ENSPCIG00000003191.1
E	Vombatus ursinus	VOMUR29048	A0A4X2JXE0
E	Xenopus laevis	XENLA37007	A0A974C3V1
E	Aplysia californica	APLCA47449	LOC124139822
E	Schmidtea mediterranea	SCHMD21809	mk4.014116.01

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