OMA group 1103697 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1103697 with 17 members.

Fingerprint: QGFGFEK | Uncharacterized protein

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Members 17

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Callorhinchus milii	CALMI25503	A0A4W3HNF3
E	Caenorhabditis brenneri	CAEBE11429	G0MQM4
E	Caenorhabditis briggsae	CAEBR19892	A0AAE9FIH6
E	Caenorhabditis elegans	CAEEL19467	Q18915
E	Caenorhabditis japonica	CAEJA18197	A0A8R1I5D8
E	Caenorhabditis remanei	CAERE04222	E3NAR5
E	Loa loa	LOALO04705	A0A1S0UFL0
E	Necator americanus	NECAM07036	W2TH19
E	Haemonchus contortus	HAECO21097	A0A7I5EEP7
E	Haemonchus placei	HAEPC03116	A0A0N4W0M7
E	Nippostrongylus brasiliensis	NIPBR14204	A0A0N4YCE1
E	Hyalella azteca	HYAAZ08597	A0A8B7PGJ7
E	Capitella teleta	CAPTE05035	R7UKH5
E	Capitella sp. 1	CAPI129254	fgenesh1_pg.C_scaffo
E	Bulinus truncatus	BULTR09653	LOTGIDRAFT_160129
E	Lottia gigantea	LOTGI10969	V4AGV7
E	Nematostella vectensis	NEMVE02583	gw.2060.6.1

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