OMA group 1098349 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1098349 with 25 members.

Fingerprint: FRNNDAP | Hyaluronan/mRNA-binding protein domain-containing protein

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Members 25

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
E	Scyliorhinus torazame	SCYTO03104	A0A401PLR6
E	Chiloscyllium punctatum	CHIPU08440	A0A401SI17
E	Lepisosteus oculatus	LEPOC07149	W5MS63
E	Anguilla anguilla	ANGAN48018	XP_035245816
E	Esox lucius	ESOLU43454	A0A3P8Y4E2
E	Salmo salar	SALSA69727	ENSSSAG00000070313.2
E	Salmo trutta	SALTR69980	A0A673YWR9
E	Astyanax mexicanus	ASTMX20773	A0A8T2L383
E	Pygocentrus nattereri	PYGNA02141	A0A3B4DQQ0
E	Electrophorus electricus	ELEEL22061	A0A4W4ERM3
E	Ictalurus punctatus	ICTPU11912	ENSIPUG00000004762.1
E	Cyprinus carpio carpio	CYPCA98708	A0A8C1B9M7
E	Danio rerio	DANRE21571	HABP4_DANRE
E	Echinops telfairi	ECHTE07620	ENSETEG00000011475
E	Balaenoptera musculus	BALMU13330	A0A8B8XWT0
E	Xenopus tropicalis	XENTR03520	A0A6I8QA50
E	Xenopus laevis	XENLA05400	A0A974DW37
E	Haemaphysalis longicornis	HAELO25474	A0A9J6H2K3
E	Centruroides sculpturatus	CENSC04791	XP_023216060
E	Arabis alpina	ARAAL12632	A0A087GND8
E	Brassica rapa subsp. pekinensis	BRARP33407	M4DLW5
E	Brassica napus	BRANA39302	A0A078HY34
E	Arabidopsis lyrata	ARALY28073	fgenesh2_kg.8__73__A
E	Arabidopsis thaliana	ARATH37499	RGGC_ARATH
E	Eutrema salsugineum	EUTSA28297	V4N3K7

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