OMA group 1084410 members

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

Search

How does the search work?

Input a query in the search field. Everytime you press Space or Enter after a word, a token will be created. The token is composed of a prefix describing how the query should be treated and the actual query itself.

What are the different types of tokens?

Each token represents either a Gene, HOG, OMA group, or Taxon. Prefixes are used to specify which category to associate with the query term.

Category	Prefixes
Genes	id, go, ec, description, domain, sequence
HOGs	hog, sequence
OMA Groups	omagroup, fingerprint, sequence
Taxon	species, taxid, taxon

For example, the token [go:4225] will search for genes in the OMA database annotated with the GO:0004225 gene ontology term.
How to search for a multi-word query?

If your query term is composed of multiple words (e.g homo sapiens), use " " to encapsulate it.

How many tokens can I have?

There is no limit on the number of tokens. It is not possible to enter multiple tokens of different categories, except taxon, which can be combined with other categories. For example, you can search for 'hog:60627 species:HUMAN' to return human genes found in HOG:606207.

How to edit/delete a token?

To edit a query, click on it to modify the input field. To edit a prefix, click on the dropdown icon to select another one. To remove a token, click on the x to delete it.

Autosuggest

Typing a query without hitting enter or space will prompt an autosuggestion for the identifier after a few seconds.

OMA GROUP 1084410 with 33 members.

Fingerprint: GITWNEK | Derived by automated computational analysis using gene prediction method Gnomon

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Members 33

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Alignment

Domains	Taxon	Protein ID	Cross reference	Domain Architectures
B	Frankia sp. (strain EAN1pec)	FRASN00502	Franean1_0514
B	Rhodococcus hoagii (strain 103S)	RHOH100141	WP_013414475
B	Streptomyces hygroscopicus subsp. jinggangensis (strain 5008)	STRHJ00212	SHJG_0240
B	Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199)	NOVAD01550	WP_011445217
B	Paraburkholderia xenovorans (strain LB400)	PARXL07620	Bxeno_C0337
B	Variovorax paradoxus (strain S110)	VARPS05432	Vapar_5506
B	Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)	ACIAD01662	ACIAD1825
B	Pseudomonas putida (strain BIRD-1)	PSEPB02357	PPUBIRD1_2442
E	Branchiostoma floridae	BRAFL41056	A0A9J7HT74
E	Sinocyclocheilus grahami	SINGR34257	A0A672PDW7
E	Lytechinus variegatus	LYTVA31049	XP_041484546
E	Dermatophagoides pteronyssinus	DERPT02371	A0A6P6YJ55
E	Panonychus citri	PANCT12693	XP_053210306
E	Ixodes scapularis	IXOSC19654	LOC115318210
E	Folsomia candida	FOLCA18109	A0A226DQA2
E	Papilio machaon	PAPMA07540	XP_014363209
E	Tribolium castaneum	TRICA07511	D6WJC7
E	Anopheles stephensi	ANOST05718	A0A182YB82
E	Anopheles gambiae	ANOGA03763	AGAP001501
E	Aedes aegypti	AEDAE02857	Q17ME7
E	Aedes albopictus	AEDAL01033	AALFPA_055756
E	Harpegnathos saltator	HARSA14976	E2B6Z8
E	Cimex lectularius	CIMLE08273	A0A8I6S9T6
E	Diaphorina citri	DIACI15845	LOC103519478
E	Pediculus humanus subsp. corporis	PEDHC10351	E0W247

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